Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC20.41■□□□□ 0.86
HOXC10Q9NYD6 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HOXC10Q9NYD6 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
HOXC10Q9NYD6 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HOXC10Q9NYD6 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
HOXC10Q9NYD6 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HOXC10Q9NYD6 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HOXC10Q9NYD6 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC20.41■□□□□ 0.86
HOXC10Q9NYD6 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.41■□□□□ 0.86
HOXC10Q9NYD6 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
HOXC10Q9NYD6 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HOXC10Q9NYD6 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HOXC10Q9NYD6 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
HOXC10Q9NYD6 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
HOXC10Q9NYD6 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HOXC10Q9NYD6 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
HOXC10Q9NYD6 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HOXC10Q9NYD6 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
HOXC10Q9NYD6 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HOXC10Q9NYD6 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
HOXC10Q9NYD6 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HOXC10Q9NYD6 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
HOXC10Q9NYD6 BEX3-201ENST00000361298 921 ntTSL 2 BASIC20.4■□□□□ 0.86
HOXC10Q9NYD6 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
HOXC10Q9NYD6 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HOXC10Q9NYD6 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HOXC10Q9NYD6 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.4■□□□□ 0.86
HOXC10Q9NYD6 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HOXC10Q9NYD6 YBX2P1-201ENST00000394192 760 ntBASIC20.4■□□□□ 0.86
HOXC10Q9NYD6 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.4■□□□□ 0.86
HOXC10Q9NYD6 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
HOXC10Q9NYD6 AC112482.1-201ENST00000492080 688 ntBASIC20.4■□□□□ 0.86
HOXC10Q9NYD6 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC20.4■□□□□ 0.86
HOXC10Q9NYD6 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
HOXC10Q9NYD6 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC20.4■□□□□ 0.86
HOXC10Q9NYD6 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC20.4■□□□□ 0.86
HOXC10Q9NYD6 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC20.4■□□□□ 0.86
HOXC10Q9NYD6 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC20.4■□□□□ 0.86
HOXC10Q9NYD6 AL096828.2-201ENST00000567259 1965 ntBASIC20.4■□□□□ 0.86
HOXC10Q9NYD6 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC20.4■□□□□ 0.86
HOXC10Q9NYD6 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC20.4■□□□□ 0.86
HOXC10Q9NYD6 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.4■□□□□ 0.86
HOXC10Q9NYD6 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
HOXC10Q9NYD6 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC20.4■□□□□ 0.86
HOXC10Q9NYD6 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HOXC10Q9NYD6 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
HOXC10Q9NYD6 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HOXC10Q9NYD6 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.39■□□□□ 0.86
HOXC10Q9NYD6 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.86
HOXC10Q9NYD6 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.39■□□□□ 0.86
HOXC10Q9NYD6 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.39■□□□□ 0.86
HOXC10Q9NYD6 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
HOXC10Q9NYD6 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
HOXC10Q9NYD6 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HOXC10Q9NYD6 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HOXC10Q9NYD6 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.85
HOXC10Q9NYD6 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.39■□□□□ 0.85
HOXC10Q9NYD6 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC20.39■□□□□ 0.85
HOXC10Q9NYD6 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC20.39■□□□□ 0.85
HOXC10Q9NYD6 AC004832.2-201ENST00000426397 482 ntBASIC20.39■□□□□ 0.85
HOXC10Q9NYD6 GPX1P2-201ENST00000429271 606 ntBASIC20.39■□□□□ 0.85
HOXC10Q9NYD6 AC007967.2-201ENST00000432613 625 ntBASIC20.39■□□□□ 0.85
HOXC10Q9NYD6 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC20.39■□□□□ 0.85
HOXC10Q9NYD6 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC20.39■□□□□ 0.85
HOXC10Q9NYD6 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HOXC10Q9NYD6 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.39■□□□□ 0.85
HOXC10Q9NYD6 AC116407.2-201ENST00000613639 860 ntBASIC20.39■□□□□ 0.85
HOXC10Q9NYD6 AL691403.2-201ENST00000618460 490 ntBASIC20.39■□□□□ 0.85
HOXC10Q9NYD6 AC004706.3-202ENST00000621574 984 ntBASIC20.39■□□□□ 0.85
HOXC10Q9NYD6 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.39■□□□□ 0.85
HOXC10Q9NYD6 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
HOXC10Q9NYD6 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HOXC10Q9NYD6 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HOXC10Q9NYD6 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HOXC10Q9NYD6 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
HOXC10Q9NYD6 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.39■□□□□ 0.85
HOXC10Q9NYD6 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
HOXC10Q9NYD6 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
HOXC10Q9NYD6 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HOXC10Q9NYD6 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HOXC10Q9NYD6 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.38■□□□□ 0.85
HOXC10Q9NYD6 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
HOXC10Q9NYD6 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC20.38■□□□□ 0.85
HOXC10Q9NYD6 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
HOXC10Q9NYD6 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
HOXC10Q9NYD6 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
HOXC10Q9NYD6 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC20.38■□□□□ 0.85
HOXC10Q9NYD6 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.38■□□□□ 0.85
HOXC10Q9NYD6 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.38■□□□□ 0.85
HOXC10Q9NYD6 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC20.38■□□□□ 0.85
HOXC10Q9NYD6 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC20.38■□□□□ 0.85
HOXC10Q9NYD6 AC010327.4-202ENST00000591484 748 ntBASIC20.38■□□□□ 0.85
HOXC10Q9NYD6 HOTTIP_1.1-201ENST00000620415 57 ntBASIC20.38■□□□□ 0.85
HOXC10Q9NYD6 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
HOXC10Q9NYD6 AC132938.5-201ENST00000624980 1813 ntBASIC20.38■□□□□ 0.85
HOXC10Q9NYD6 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HOXC10Q9NYD6 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HOXC10Q9NYD6 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
HOXC10Q9NYD6 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HOXC10Q9NYD6 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms