Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
VPS11Q9H270 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
VPS11Q9H270 UNC93B2-201ENST00000285383 730 ntBASIC18.04■□□□□ 0.48
VPS11Q9H270 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.04■□□□□ 0.48
VPS11Q9H270 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.04■□□□□ 0.48
VPS11Q9H270 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.04■□□□□ 0.48
VPS11Q9H270 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VPS11Q9H270 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.04■□□□□ 0.48
VPS11Q9H270 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.04■□□□□ 0.48
VPS11Q9H270 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.04■□□□□ 0.48
VPS11Q9H270 Z99916.2-201ENST00000604037 246 ntBASIC18.04■□□□□ 0.48
VPS11Q9H270 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.04■□□□□ 0.48
VPS11Q9H270 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VPS11Q9H270 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VPS11Q9H270 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VPS11Q9H270 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.04■□□□□ 0.48
VPS11Q9H270 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VPS11Q9H270 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VPS11Q9H270 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
VPS11Q9H270 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
VPS11Q9H270 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VPS11Q9H270 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VPS11Q9H270 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VPS11Q9H270 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VPS11Q9H270 AL024508.2-201ENST00000607749 1894 ntBASIC18.03■□□□□ 0.48
VPS11Q9H270 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VPS11Q9H270 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
VPS11Q9H270 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VPS11Q9H270 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VPS11Q9H270 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
VPS11Q9H270 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VPS11Q9H270 RBM17P1-201ENST00000453646 1190 ntBASIC18.03■□□□□ 0.48
VPS11Q9H270 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.03■□□□□ 0.48
VPS11Q9H270 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.03■□□□□ 0.48
VPS11Q9H270 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
VPS11Q9H270 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.03■□□□□ 0.48
VPS11Q9H270 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
VPS11Q9H270 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
VPS11Q9H270 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.03■□□□□ 0.48
VPS11Q9H270 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VPS11Q9H270 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
VPS11Q9H270 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VPS11Q9H270 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VPS11Q9H270 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
VPS11Q9H270 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VPS11Q9H270 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VPS11Q9H270 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VPS11Q9H270 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.02■□□□□ 0.48
VPS11Q9H270 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.02■□□□□ 0.48
VPS11Q9H270 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
VPS11Q9H270 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VPS11Q9H270 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VPS11Q9H270 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
VPS11Q9H270 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.02■□□□□ 0.48
VPS11Q9H270 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
VPS11Q9H270 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VPS11Q9H270 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
VPS11Q9H270 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VPS11Q9H270 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
VPS11Q9H270 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
VPS11Q9H270 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.02■□□□□ 0.48
VPS11Q9H270 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
VPS11Q9H270 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
VPS11Q9H270 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.02■□□□□ 0.48
VPS11Q9H270 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.48
VPS11Q9H270 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
VPS11Q9H270 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.02■□□□□ 0.48
VPS11Q9H270 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VPS11Q9H270 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
VPS11Q9H270 CCR12P-201ENST00000446203 998 ntBASIC18.02■□□□□ 0.48
VPS11Q9H270 BX088651.1-201ENST00000540551 451 ntBASIC18.02■□□□□ 0.48
VPS11Q9H270 AC104390.1-201ENST00000555663 520 ntBASIC18.02■□□□□ 0.48
VPS11Q9H270 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
VPS11Q9H270 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.02■□□□□ 0.48
VPS11Q9H270 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
VPS11Q9H270 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.47
VPS11Q9H270 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
VPS11Q9H270 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.47
VPS11Q9H270 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.47
VPS11Q9H270 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
VPS11Q9H270 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.02■□□□□ 0.47
VPS11Q9H270 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
VPS11Q9H270 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.47
VPS11Q9H270 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VPS11Q9H270 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
VPS11Q9H270 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.01■□□□□ 0.47
VPS11Q9H270 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.01■□□□□ 0.47
VPS11Q9H270 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.01■□□□□ 0.47
VPS11Q9H270 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VPS11Q9H270 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VPS11Q9H270 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VPS11Q9H270 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VPS11Q9H270 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VPS11Q9H270 AC092338.2-201ENST00000568827 1415 ntBASIC18.01■□□□□ 0.47
VPS11Q9H270 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
VPS11Q9H270 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VPS11Q9H270 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VPS11Q9H270 AL390955.1-201ENST00000428694 934 ntBASIC18.01■□□□□ 0.47
VPS11Q9H270 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.01■□□□□ 0.47
VPS11Q9H270 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms