Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.49■□□□□ 0.55
FOXP3Q9BZS1 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.49■□□□□ 0.55
FOXP3Q9BZS1 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
FOXP3Q9BZS1 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
FOXP3Q9BZS1 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXP3Q9BZS1 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
FOXP3Q9BZS1 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.49■□□□□ 0.55
FOXP3Q9BZS1 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
FOXP3Q9BZS1 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXP3Q9BZS1 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
FOXP3Q9BZS1 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.49■□□□□ 0.55
FOXP3Q9BZS1 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
FOXP3Q9BZS1 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXP3Q9BZS1 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
FOXP3Q9BZS1 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.49■□□□□ 0.55
FOXP3Q9BZS1 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.48■□□□□ 0.55
FOXP3Q9BZS1 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
FOXP3Q9BZS1 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
FOXP3Q9BZS1 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.48■□□□□ 0.55
FOXP3Q9BZS1 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXP3Q9BZS1 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.48■□□□□ 0.55
FOXP3Q9BZS1 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.48■□□□□ 0.55
FOXP3Q9BZS1 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.48■□□□□ 0.55
FOXP3Q9BZS1 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.48■□□□□ 0.55
FOXP3Q9BZS1 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.48■□□□□ 0.55
FOXP3Q9BZS1 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.48■□□□□ 0.55
FOXP3Q9BZS1 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXP3Q9BZS1 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
FOXP3Q9BZS1 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.48■□□□□ 0.55
FOXP3Q9BZS1 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.48■□□□□ 0.55
FOXP3Q9BZS1 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
FOXP3Q9BZS1 AP003041.3-201ENST00000527151 707 ntBASIC18.48■□□□□ 0.55
FOXP3Q9BZS1 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.48■□□□□ 0.55
FOXP3Q9BZS1 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.48■□□□□ 0.55
FOXP3Q9BZS1 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.48■□□□□ 0.55
FOXP3Q9BZS1 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.48■□□□□ 0.55
FOXP3Q9BZS1 AL023973.1-201ENST00000624619 620 ntBASIC18.48■□□□□ 0.55
FOXP3Q9BZS1 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.48■□□□□ 0.55
FOXP3Q9BZS1 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXP3Q9BZS1 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
FOXP3Q9BZS1 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXP3Q9BZS1 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
FOXP3Q9BZS1 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXP3Q9BZS1 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
FOXP3Q9BZS1 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.48■□□□□ 0.55
FOXP3Q9BZS1 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
FOXP3Q9BZS1 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
FOXP3Q9BZS1 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.47■□□□□ 0.55
FOXP3Q9BZS1 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.47■□□□□ 0.55
FOXP3Q9BZS1 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.47■□□□□ 0.55
FOXP3Q9BZS1 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXP3Q9BZS1 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.47■□□□□ 0.55
FOXP3Q9BZS1 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.47■□□□□ 0.55
FOXP3Q9BZS1 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXP3Q9BZS1 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.47■□□□□ 0.55
FOXP3Q9BZS1 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.47■□□□□ 0.55
FOXP3Q9BZS1 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
FOXP3Q9BZS1 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXP3Q9BZS1 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXP3Q9BZS1 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
FOXP3Q9BZS1 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXP3Q9BZS1 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXP3Q9BZS1 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
FOXP3Q9BZS1 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.47■□□□□ 0.55
FOXP3Q9BZS1 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.47■□□□□ 0.55
FOXP3Q9BZS1 AL359075.1-203ENST00000462729 1002 ntBASIC18.47■□□□□ 0.55
FOXP3Q9BZS1 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.47■□□□□ 0.55
FOXP3Q9BZS1 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
FOXP3Q9BZS1 AC104390.1-201ENST00000555663 520 ntBASIC18.47■□□□□ 0.55
FOXP3Q9BZS1 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.47■□□□□ 0.55
FOXP3Q9BZS1 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.47■□□□□ 0.55
FOXP3Q9BZS1 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.47■□□□□ 0.55
FOXP3Q9BZS1 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
FOXP3Q9BZS1 AL121761.2-201ENST00000598007 1648 ntBASIC18.47■□□□□ 0.55
FOXP3Q9BZS1 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXP3Q9BZS1 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
FOXP3Q9BZS1 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
FOXP3Q9BZS1 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
FOXP3Q9BZS1 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXP3Q9BZS1 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXP3Q9BZS1 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXP3Q9BZS1 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.47■□□□□ 0.55
FOXP3Q9BZS1 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
FOXP3Q9BZS1 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXP3Q9BZS1 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXP3Q9BZS1 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXP3Q9BZS1 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.47■□□□□ 0.55
FOXP3Q9BZS1 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXP3Q9BZS1 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXP3Q9BZS1 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXP3Q9BZS1 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.47■□□□□ 0.55
FOXP3Q9BZS1 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.47■□□□□ 0.55
FOXP3Q9BZS1 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXP3Q9BZS1 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.47■□□□□ 0.55
FOXP3Q9BZS1 LINC00602-201ENST00000629776 2065 ntBASIC18.46■□□□□ 0.55
FOXP3Q9BZS1 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
FOXP3Q9BZS1 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
FOXP3Q9BZS1 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
FOXP3Q9BZS1 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
FOXP3Q9BZS1 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms