Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 ATP5G1P1-201ENST00000448724 379 ntBASIC21.37■■□□□ 1.01
UPF3BQ9BZI7 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UPF3BQ9BZI7 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
UPF3BQ9BZI7 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC21.37■■□□□ 1.01
UPF3BQ9BZI7 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC21.37■■□□□ 1.01
UPF3BQ9BZI7 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC21.37■■□□□ 1.01
UPF3BQ9BZI7 P4HB-223ENST00000576390 439 ntTSL 4 BASIC21.37■■□□□ 1.01
UPF3BQ9BZI7 AC140113.3-201ENST00000605663 199 ntBASIC21.37■■□□□ 1.01
UPF3BQ9BZI7 AC011558.1-201ENST00000623459 338 ntBASIC21.37■■□□□ 1.01
UPF3BQ9BZI7 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC21.37■■□□□ 1.01
UPF3BQ9BZI7 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
UPF3BQ9BZI7 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC21.37■■□□□ 1.01
UPF3BQ9BZI7 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UPF3BQ9BZI7 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC21.37■■□□□ 1.01
UPF3BQ9BZI7 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC21.37■■□□□ 1.01
UPF3BQ9BZI7 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UPF3BQ9BZI7 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UPF3BQ9BZI7 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC21.37■■□□□ 1.01
UPF3BQ9BZI7 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
UPF3BQ9BZI7 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
UPF3BQ9BZI7 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC21.36■■□□□ 1.01
UPF3BQ9BZI7 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
UPF3BQ9BZI7 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UPF3BQ9BZI7 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC21.36■■□□□ 1.01
UPF3BQ9BZI7 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
UPF3BQ9BZI7 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
UPF3BQ9BZI7 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UPF3BQ9BZI7 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
UPF3BQ9BZI7 AL391807.1-203ENST00000604392 2365 ntBASIC21.36■■□□□ 1.01
UPF3BQ9BZI7 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
UPF3BQ9BZI7 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UPF3BQ9BZI7 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
UPF3BQ9BZI7 TERF1P1-201ENST00000311003 1181 ntBASIC21.36■■□□□ 1.01
UPF3BQ9BZI7 ANKRD20A18P-201ENST00000359341 492 ntBASIC21.36■■□□□ 1.01
UPF3BQ9BZI7 AC113347.1-201ENST00000413321 391 ntBASIC21.36■■□□□ 1.01
UPF3BQ9BZI7 COX11P1-201ENST00000489116 835 ntBASIC21.36■■□□□ 1.01
UPF3BQ9BZI7 AC034232.1-201ENST00000506026 1064 ntBASIC21.36■■□□□ 1.01
UPF3BQ9BZI7 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC21.36■■□□□ 1.01
UPF3BQ9BZI7 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC21.36■■□□□ 1.01
UPF3BQ9BZI7 AC139887.4-201ENST00000607877 719 ntBASIC21.36■■□□□ 1.01
UPF3BQ9BZI7 BANP-227ENST00000626016 2144 ntTSL 2 BASIC21.36■■□□□ 1.01
UPF3BQ9BZI7 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
UPF3BQ9BZI7 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
UPF3BQ9BZI7 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
UPF3BQ9BZI7 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UPF3BQ9BZI7 AC080080.1-201ENST00000625121 2420 ntBASIC21.36■■□□□ 1.01
UPF3BQ9BZI7 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UPF3BQ9BZI7 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
UPF3BQ9BZI7 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
UPF3BQ9BZI7 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
UPF3BQ9BZI7 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
UPF3BQ9BZI7 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC21.35■■□□□ 1.01
UPF3BQ9BZI7 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC21.35■■□□□ 1.01
UPF3BQ9BZI7 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
UPF3BQ9BZI7 HES2-202ENST00000377836 507 ntTSL 2 BASIC21.35■■□□□ 1.01
UPF3BQ9BZI7 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
UPF3BQ9BZI7 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC21.35■■□□□ 1.01
UPF3BQ9BZI7 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC21.35■■□□□ 1.01
UPF3BQ9BZI7 AL136038.4-201ENST00000603606 1261 ntBASIC21.35■■□□□ 1.01
UPF3BQ9BZI7 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC21.35■■□□□ 1.01
UPF3BQ9BZI7 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
UPF3BQ9BZI7 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
UPF3BQ9BZI7 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
UPF3BQ9BZI7 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
UPF3BQ9BZI7 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
UPF3BQ9BZI7 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC21.35■■□□□ 1.01
UPF3BQ9BZI7 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
UPF3BQ9BZI7 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC21.35■■□□□ 1.01
UPF3BQ9BZI7 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
UPF3BQ9BZI7 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
UPF3BQ9BZI7 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC21.35■■□□□ 1.01
UPF3BQ9BZI7 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC21.35■■□□□ 1.01
UPF3BQ9BZI7 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC21.35■■□□□ 1.01
UPF3BQ9BZI7 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
UPF3BQ9BZI7 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
UPF3BQ9BZI7 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
UPF3BQ9BZI7 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
UPF3BQ9BZI7 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
UPF3BQ9BZI7 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC21.34■■□□□ 1.01
UPF3BQ9BZI7 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
UPF3BQ9BZI7 LGALS8-AS1-201ENST00000487567 1457 ntBASIC21.34■■□□□ 1.01
UPF3BQ9BZI7 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
UPF3BQ9BZI7 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
UPF3BQ9BZI7 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC21.34■■□□□ 1.01
UPF3BQ9BZI7 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC21.34■■□□□ 1.01
UPF3BQ9BZI7 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
UPF3BQ9BZI7 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
UPF3BQ9BZI7 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC21.34■■□□□ 1.01
UPF3BQ9BZI7 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
UPF3BQ9BZI7 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
UPF3BQ9BZI7 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
UPF3BQ9BZI7 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC21.34■■□□□ 1.01
UPF3BQ9BZI7 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
UPF3BQ9BZI7 AC005521.1-201ENST00000393351 872 ntBASIC21.34■■□□□ 1.01
UPF3BQ9BZI7 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
UPF3BQ9BZI7 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.34■■□□□ 1.01
UPF3BQ9BZI7 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC21.34■■□□□ 1.01
UPF3BQ9BZI7 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
UPF3BQ9BZI7 AC073508.3-201ENST00000619697 1419 ntBASIC21.34■■□□□ 1.01
UPF3BQ9BZI7 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms