Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC6.08□□□□□ -1.44
KRTAP4-3Q9BYR4 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC6.08□□□□□ -1.44
KRTAP4-3Q9BYR4 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
KRTAP4-3Q9BYR4 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC6.08□□□□□ -1.44
KRTAP4-3Q9BYR4 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
KRTAP4-3Q9BYR4 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC6.08□□□□□ -1.44
KRTAP4-3Q9BYR4 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC6.08□□□□□ -1.44
KRTAP4-3Q9BYR4 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
KRTAP4-3Q9BYR4 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC6.08□□□□□ -1.44
KRTAP4-3Q9BYR4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
KRTAP4-3Q9BYR4 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC6.08□□□□□ -1.44
KRTAP4-3Q9BYR4 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
KRTAP4-3Q9BYR4 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
KRTAP4-3Q9BYR4 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
KRTAP4-3Q9BYR4 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
KRTAP4-3Q9BYR4 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
KRTAP4-3Q9BYR4 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
KRTAP4-3Q9BYR4 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
KRTAP4-3Q9BYR4 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC6.08□□□□□ -1.44
KRTAP4-3Q9BYR4 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
KRTAP4-3Q9BYR4 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC6.08□□□□□ -1.44
KRTAP4-3Q9BYR4 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
KRTAP4-3Q9BYR4 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC6.08□□□□□ -1.44
KRTAP4-3Q9BYR4 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
KRTAP4-3Q9BYR4 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC6.08□□□□□ -1.44
KRTAP4-3Q9BYR4 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
KRTAP4-3Q9BYR4 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
KRTAP4-3Q9BYR4 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC6.08□□□□□ -1.44
KRTAP4-3Q9BYR4 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
KRTAP4-3Q9BYR4 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 POR-209ENST00000439269 1858 ntTSL 2 BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 CSF3-203ENST00000394148 622 ntTSL 3 BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 AL031284.1-201ENST00000419297 478 ntBASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 AC007967.3-201ENST00000434308 558 ntBASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 BX005266.1-201ENST00000473402 457 ntBASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 RNPS1P1-201ENST00000507437 918 ntBASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 AC073648.2-201ENST00000510116 352 ntBASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 POLD2P1-201ENST00000511220 997 ntBASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 AC106795.1-205ENST00000512851 1056 ntBASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 AC021087.4-201ENST00000563761 564 ntBASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms