Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 AC099398.1-201ENST00000567919 2776 ntBASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 UROS-202ENST00000368778 1556 ntTSL 2 BASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CHRDL1Q9BU40 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CHRDL1Q9BU40 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CHRDL1Q9BU40 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHRDL1Q9BU40 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHRDL1Q9BU40 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CHRDL1Q9BU40 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.25□□□□□ -0.13
CHRDL1Q9BU40 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC14.25□□□□□ -0.13
CHRDL1Q9BU40 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHRDL1Q9BU40 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
CHRDL1Q9BU40 LINC01568-207ENST00000641790 1380 ntBASIC14.25□□□□□ -0.13
CHRDL1Q9BU40 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC14.25□□□□□ -0.13
CHRDL1Q9BU40 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CHRDL1Q9BU40 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHRDL1Q9BU40 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHRDL1Q9BU40 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC14.25□□□□□ -0.13
CHRDL1Q9BU40 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHRDL1Q9BU40 SNCG-201ENST00000348795 684 ntTSL 2 BASIC14.25□□□□□ -0.13
CHRDL1Q9BU40 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHRDL1Q9BU40 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC14.25□□□□□ -0.13
CHRDL1Q9BU40 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC14.25□□□□□ -0.13
CHRDL1Q9BU40 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC14.25□□□□□ -0.13
CHRDL1Q9BU40 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC14.25□□□□□ -0.13
CHRDL1Q9BU40 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CHRDL1Q9BU40 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHRDL1Q9BU40 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHRDL1Q9BU40 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CHRDL1Q9BU40 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHRDL1Q9BU40 AC141586.5-201ENST00000624546 2050 ntBASIC14.25□□□□□ -0.13
CHRDL1Q9BU40 CEP83-AS1-201ENST00000623122 2482 ntBASIC14.25□□□□□ -0.13
CHRDL1Q9BU40 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHRDL1Q9BU40 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
CHRDL1Q9BU40 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHRDL1Q9BU40 SDHAP2-201ENST00000455183 2001 ntBASIC14.25□□□□□ -0.13
CHRDL1Q9BU40 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHRDL1Q9BU40 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CHRDL1Q9BU40 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.25□□□□□ -0.13
CHRDL1Q9BU40 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHRDL1Q9BU40 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHRDL1Q9BU40 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.13
CHRDL1Q9BU40 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CHRDL1Q9BU40 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHRDL1Q9BU40 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHRDL1Q9BU40 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.25□□□□□ -0.13
CHRDL1Q9BU40 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
CHRDL1Q9BU40 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHRDL1Q9BU40 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CHRDL1Q9BU40 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHRDL1Q9BU40 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHRDL1Q9BU40 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHRDL1Q9BU40 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHRDL1Q9BU40 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHRDL1Q9BU40 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CHRDL1Q9BU40 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC14.24□□□□□ -0.13
CHRDL1Q9BU40 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHRDL1Q9BU40 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHRDL1Q9BU40 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CHRDL1Q9BU40 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC14.24□□□□□ -0.13
CHRDL1Q9BU40 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHRDL1Q9BU40 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC14.24□□□□□ -0.13
CHRDL1Q9BU40 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CHRDL1Q9BU40 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHRDL1Q9BU40 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC14.24□□□□□ -0.13
CHRDL1Q9BU40 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC14.24□□□□□ -0.13
CHRDL1Q9BU40 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CHRDL1Q9BU40 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC14.24□□□□□ -0.13
CHRDL1Q9BU40 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC14.24□□□□□ -0.13
CHRDL1Q9BU40 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CHRDL1Q9BU40 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHRDL1Q9BU40 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CHRDL1Q9BU40 GMCL1P1-201ENST00000463439 1581 ntBASIC14.24□□□□□ -0.13
CHRDL1Q9BU40 FLYWCH1P1-201ENST00000460917 1874 ntBASIC14.24□□□□□ -0.13
CHRDL1Q9BU40 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC14.24□□□□□ -0.13
CHRDL1Q9BU40 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CHRDL1Q9BU40 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CHRDL1Q9BU40 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC14.24□□□□□ -0.13
CHRDL1Q9BU40 AC009102.3-201ENST00000623118 1491 ntBASIC14.24□□□□□ -0.13
CHRDL1Q9BU40 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
CHRDL1Q9BU40 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
CHRDL1Q9BU40 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHRDL1Q9BU40 AC012317.2-201ENST00000623305 2251 ntBASIC14.24□□□□□ -0.13
CHRDL1Q9BU40 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC14.23□□□□□ -0.13
CHRDL1Q9BU40 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHRDL1Q9BU40 AC068587.6-202ENST00000641839 5619 ntBASIC14.23□□□□□ -0.13
CHRDL1Q9BU40 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHRDL1Q9BU40 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHRDL1Q9BU40 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHRDL1Q9BU40 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHRDL1Q9BU40 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHRDL1Q9BU40 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CHRDL1Q9BU40 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms