Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC15.44■□□□□ 0.06
GFI1Q99684 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC15.44■□□□□ 0.06
GFI1Q99684 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
GFI1Q99684 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.44■□□□□ 0.06
GFI1Q99684 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC15.44■□□□□ 0.06
GFI1Q99684 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC15.44■□□□□ 0.06
GFI1Q99684 AL353719.1-201ENST00000566847 864 ntBASIC15.44■□□□□ 0.06
GFI1Q99684 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC15.44■□□□□ 0.06
GFI1Q99684 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC15.44■□□□□ 0.06
GFI1Q99684 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC15.44■□□□□ 0.06
GFI1Q99684 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC15.44■□□□□ 0.06
GFI1Q99684 REXO1L10P-201ENST00000615707 1290 ntBASIC15.44■□□□□ 0.06
GFI1Q99684 AL359736.2-201ENST00000621992 437 ntBASIC15.44■□□□□ 0.06
GFI1Q99684 REXO1L12P-201ENST00000622156 912 ntBASIC15.44■□□□□ 0.06
GFI1Q99684 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
GFI1Q99684 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
GFI1Q99684 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
GFI1Q99684 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC15.44■□□□□ 0.06
GFI1Q99684 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
GFI1Q99684 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
GFI1Q99684 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
GFI1Q99684 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC15.44■□□□□ 0.06
GFI1Q99684 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.44■□□□□ 0.06
GFI1Q99684 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
GFI1Q99684 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
GFI1Q99684 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
GFI1Q99684 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
GFI1Q99684 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC15.44■□□□□ 0.06
GFI1Q99684 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
GFI1Q99684 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.44■□□□□ 0.06
GFI1Q99684 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC15.43■□□□□ 0.06
GFI1Q99684 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.43■□□□□ 0.06
GFI1Q99684 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
GFI1Q99684 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.43■□□□□ 0.06
GFI1Q99684 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
GFI1Q99684 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
GFI1Q99684 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
GFI1Q99684 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
GFI1Q99684 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
GFI1Q99684 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
GFI1Q99684 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
GFI1Q99684 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
GFI1Q99684 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.43■□□□□ 0.06
GFI1Q99684 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
GFI1Q99684 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
GFI1Q99684 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
GFI1Q99684 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
GFI1Q99684 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
GFI1Q99684 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
GFI1Q99684 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC15.43■□□□□ 0.06
GFI1Q99684 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
GFI1Q99684 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
GFI1Q99684 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC15.43■□□□□ 0.06
GFI1Q99684 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
GFI1Q99684 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
GFI1Q99684 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
GFI1Q99684 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
GFI1Q99684 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
GFI1Q99684 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
GFI1Q99684 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.42■□□□□ 0.06
GFI1Q99684 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GFI1Q99684 AC046158.3-201ENST00000624947 2558 ntBASIC15.42■□□□□ 0.06
GFI1Q99684 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
GFI1Q99684 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GFI1Q99684 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.42■□□□□ 0.06
GFI1Q99684 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GFI1Q99684 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
GFI1Q99684 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GFI1Q99684 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.42■□□□□ 0.06
GFI1Q99684 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
GFI1Q99684 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
GFI1Q99684 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GFI1Q99684 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
GFI1Q99684 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.42■□□□□ 0.06
GFI1Q99684 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
GFI1Q99684 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GFI1Q99684 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC15.42■□□□□ 0.06
GFI1Q99684 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC15.42■□□□□ 0.06
GFI1Q99684 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.42■□□□□ 0.06
GFI1Q99684 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC15.42■□□□□ 0.06
GFI1Q99684 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.42■□□□□ 0.06
GFI1Q99684 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.42■□□□□ 0.06
GFI1Q99684 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC15.42■□□□□ 0.06
GFI1Q99684 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC15.42■□□□□ 0.06
GFI1Q99684 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GFI1Q99684 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
GFI1Q99684 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.42■□□□□ 0.06
GFI1Q99684 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
GFI1Q99684 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GFI1Q99684 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
GFI1Q99684 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GFI1Q99684 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.42■□□□□ 0.06
GFI1Q99684 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.42■□□□□ 0.06
GFI1Q99684 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.42■□□□□ 0.06
GFI1Q99684 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
GFI1Q99684 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
GFI1Q99684 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.42■□□□□ 0.06
GFI1Q99684 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
GFI1Q99684 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
GFI1Q99684 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms