Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.04■□□□□ 0.32
CGREF1Q99674 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CGREF1Q99674 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.04■□□□□ 0.32
CGREF1Q99674 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CGREF1Q99674 AL355355.2-201ENST00000442321 338 ntBASIC17.04■□□□□ 0.32
CGREF1Q99674 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.04■□□□□ 0.32
CGREF1Q99674 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.04■□□□□ 0.32
CGREF1Q99674 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.04■□□□□ 0.32
CGREF1Q99674 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.04■□□□□ 0.32
CGREF1Q99674 AP001412.1-201ENST00000608405 714 ntBASIC17.04■□□□□ 0.32
CGREF1Q99674 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CGREF1Q99674 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.04■□□□□ 0.32
CGREF1Q99674 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CGREF1Q99674 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.04■□□□□ 0.32
CGREF1Q99674 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.04■□□□□ 0.32
CGREF1Q99674 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CGREF1Q99674 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CGREF1Q99674 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CGREF1Q99674 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CGREF1Q99674 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
CGREF1Q99674 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.04■□□□□ 0.32
CGREF1Q99674 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CGREF1Q99674 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CGREF1Q99674 PKD1P1-201ENST00000458669 6805 ntBASIC17.04■□□□□ 0.32
CGREF1Q99674 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.04■□□□□ 0.32
CGREF1Q99674 AL596257.1-201ENST00000641463 2694 ntBASIC17.04■□□□□ 0.32
CGREF1Q99674 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CGREF1Q99674 LINC00304-203ENST00000565008 1864 ntBASIC17.03■□□□□ 0.32
CGREF1Q99674 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CGREF1Q99674 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CGREF1Q99674 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CGREF1Q99674 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CGREF1Q99674 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
CGREF1Q99674 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CGREF1Q99674 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CGREF1Q99674 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CGREF1Q99674 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CGREF1Q99674 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.03■□□□□ 0.32
CGREF1Q99674 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.03■□□□□ 0.32
CGREF1Q99674 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.03■□□□□ 0.32
CGREF1Q99674 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CGREF1Q99674 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CGREF1Q99674 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CGREF1Q99674 AC022898.2-201ENST00000616822 1312 ntBASIC17.03■□□□□ 0.32
CGREF1Q99674 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CGREF1Q99674 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.03■□□□□ 0.32
CGREF1Q99674 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CGREF1Q99674 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.03■□□□□ 0.32
CGREF1Q99674 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CGREF1Q99674 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CGREF1Q99674 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CGREF1Q99674 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CGREF1Q99674 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CGREF1Q99674 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CGREF1Q99674 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.03■□□□□ 0.32
CGREF1Q99674 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CGREF1Q99674 AC012618.2-201ENST00000428058 849 ntBASIC17.03■□□□□ 0.32
CGREF1Q99674 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.03■□□□□ 0.32
CGREF1Q99674 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CGREF1Q99674 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.03■□□□□ 0.32
CGREF1Q99674 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.03■□□□□ 0.32
CGREF1Q99674 AC010240.3-201ENST00000607688 395 ntBASIC17.03■□□□□ 0.32
CGREF1Q99674 ITM2C-210ENST00000620962 501 ntBASIC17.03■□□□□ 0.32
CGREF1Q99674 AL049637.2-201ENST00000641778 930 ntBASIC17.03■□□□□ 0.32
CGREF1Q99674 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CGREF1Q99674 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CGREF1Q99674 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CGREF1Q99674 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CGREF1Q99674 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CGREF1Q99674 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CGREF1Q99674 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CGREF1Q99674 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
CGREF1Q99674 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CGREF1Q99674 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CGREF1Q99674 AC092338.2-201ENST00000568827 1415 ntBASIC17.03■□□□□ 0.32
CGREF1Q99674 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CGREF1Q99674 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.03■□□□□ 0.32
CGREF1Q99674 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CGREF1Q99674 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.03■□□□□ 0.32
CGREF1Q99674 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CGREF1Q99674 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CGREF1Q99674 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CGREF1Q99674 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CGREF1Q99674 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.02■□□□□ 0.32
CGREF1Q99674 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CGREF1Q99674 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CGREF1Q99674 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CGREF1Q99674 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
CGREF1Q99674 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CGREF1Q99674 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CGREF1Q99674 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CGREF1Q99674 NKILA-202ENST00000614771 2598 ntBASIC17.02■□□□□ 0.32
CGREF1Q99674 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.02■□□□□ 0.32
CGREF1Q99674 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CGREF1Q99674 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CGREF1Q99674 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CGREF1Q99674 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.02■□□□□ 0.32
CGREF1Q99674 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CGREF1Q99674 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CGREF1Q99674 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms