Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC18.57■□□□□ 0.56
CDX2Q99626 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDX2Q99626 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDX2Q99626 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDX2Q99626 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDX2Q99626 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.57■□□□□ 0.56
CDX2Q99626 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDX2Q99626 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.57■□□□□ 0.56
CDX2Q99626 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDX2Q99626 AC141586.3-201ENST00000562166 1838 ntBASIC18.56■□□□□ 0.56
CDX2Q99626 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.56■□□□□ 0.56
CDX2Q99626 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.56■□□□□ 0.56
CDX2Q99626 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.56■□□□□ 0.56
CDX2Q99626 KLF4P1-201ENST00000412782 1185 ntBASIC18.56■□□□□ 0.56
CDX2Q99626 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.56■□□□□ 0.56
CDX2Q99626 FAM185BP-201ENST00000443595 716 ntBASIC18.56■□□□□ 0.56
CDX2Q99626 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC18.56■□□□□ 0.56
CDX2Q99626 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.56■□□□□ 0.56
CDX2Q99626 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC18.56■□□□□ 0.56
CDX2Q99626 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.56■□□□□ 0.56
CDX2Q99626 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.56■□□□□ 0.56
CDX2Q99626 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.56■□□□□ 0.56
CDX2Q99626 AC099522.2-201ENST00000607001 744 ntBASIC18.56■□□□□ 0.56
CDX2Q99626 AC116407.2-201ENST00000613639 860 ntBASIC18.56■□□□□ 0.56
CDX2Q99626 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDX2Q99626 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.56■□□□□ 0.56
CDX2Q99626 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
CDX2Q99626 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDX2Q99626 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDX2Q99626 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDX2Q99626 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CDX2Q99626 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.56■□□□□ 0.56
CDX2Q99626 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CDX2Q99626 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CDX2Q99626 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CDX2Q99626 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.55■□□□□ 0.56
CDX2Q99626 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CDX2Q99626 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.55■□□□□ 0.56
CDX2Q99626 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.55■□□□□ 0.56
CDX2Q99626 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDX2Q99626 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDX2Q99626 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDX2Q99626 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDX2Q99626 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.55■□□□□ 0.56
CDX2Q99626 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDX2Q99626 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.55■□□□□ 0.56
CDX2Q99626 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDX2Q99626 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDX2Q99626 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.55■□□□□ 0.56
CDX2Q99626 AL513480.1-201ENST00000451731 511 ntBASIC18.55■□□□□ 0.56
CDX2Q99626 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.55■□□□□ 0.56
CDX2Q99626 AC010336.2-201ENST00000564226 506 ntBASIC18.55■□□□□ 0.56
CDX2Q99626 AL132655.2-201ENST00000596276 594 ntBASIC18.55■□□□□ 0.56
CDX2Q99626 AC009118.2-201ENST00000613275 655 ntBASIC18.55■□□□□ 0.56
CDX2Q99626 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.55■□□□□ 0.56
CDX2Q99626 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.55■□□□□ 0.56
CDX2Q99626 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.55■□□□□ 0.56
CDX2Q99626 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDX2Q99626 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.55■□□□□ 0.56
CDX2Q99626 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CDX2Q99626 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDX2Q99626 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDX2Q99626 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDX2Q99626 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDX2Q99626 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CDX2Q99626 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDX2Q99626 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDX2Q99626 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.54■□□□□ 0.56
CDX2Q99626 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDX2Q99626 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDX2Q99626 GABARAPL3-202ENST00000624044 1851 ntBASIC18.54■□□□□ 0.56
CDX2Q99626 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.54■□□□□ 0.56
CDX2Q99626 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDX2Q99626 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDX2Q99626 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
CDX2Q99626 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDX2Q99626 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.54■□□□□ 0.56
CDX2Q99626 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CDX2Q99626 COX5BP2-201ENST00000392354 334 ntBASIC18.54■□□□□ 0.56
CDX2Q99626 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.54■□□□□ 0.56
CDX2Q99626 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDX2Q99626 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.54■□□□□ 0.56
CDX2Q99626 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.54■□□□□ 0.56
CDX2Q99626 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.54■□□□□ 0.56
CDX2Q99626 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC18.54■□□□□ 0.56
CDX2Q99626 AC069120.2-201ENST00000524091 540 ntBASIC18.54■□□□□ 0.56
CDX2Q99626 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.54■□□□□ 0.56
CDX2Q99626 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC18.54■□□□□ 0.56
CDX2Q99626 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.54■□□□□ 0.56
CDX2Q99626 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDX2Q99626 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.54■□□□□ 0.56
CDX2Q99626 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
CDX2Q99626 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDX2Q99626 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDX2Q99626 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CDX2Q99626 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.54■□□□□ 0.56
CDX2Q99626 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CDX2Q99626 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDX2Q99626 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.54■□□□□ 0.56
CDX2Q99626 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms