Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PHOX2BQ99453 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PHOX2BQ99453 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.06■□□□□ 0.48
PHOX2BQ99453 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PHOX2BQ99453 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PHOX2BQ99453 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PHOX2BQ99453 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
PHOX2BQ99453 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PHOX2BQ99453 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.06■□□□□ 0.48
PHOX2BQ99453 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC18.06■□□□□ 0.48
PHOX2BQ99453 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.06■□□□□ 0.48
PHOX2BQ99453 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.06■□□□□ 0.48
PHOX2BQ99453 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PHOX2BQ99453 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC18.06■□□□□ 0.48
PHOX2BQ99453 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.06■□□□□ 0.48
PHOX2BQ99453 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.06■□□□□ 0.48
PHOX2BQ99453 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.06■□□□□ 0.48
PHOX2BQ99453 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.06■□□□□ 0.48
PHOX2BQ99453 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PHOX2BQ99453 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PHOX2BQ99453 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PHOX2BQ99453 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
PHOX2BQ99453 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PHOX2BQ99453 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PHOX2BQ99453 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.06■□□□□ 0.48
PHOX2BQ99453 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
PHOX2BQ99453 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PHOX2BQ99453 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PHOX2BQ99453 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PHOX2BQ99453 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.06■□□□□ 0.48
PHOX2BQ99453 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PHOX2BQ99453 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PHOX2BQ99453 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PHOX2BQ99453 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.05■□□□□ 0.48
PHOX2BQ99453 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
PHOX2BQ99453 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
PHOX2BQ99453 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.05■□□□□ 0.48
PHOX2BQ99453 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.05■□□□□ 0.48
PHOX2BQ99453 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.05■□□□□ 0.48
PHOX2BQ99453 SDHAP1-207ENST00000440850 2000 ntBASIC18.05■□□□□ 0.48
PHOX2BQ99453 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PHOX2BQ99453 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PHOX2BQ99453 MIR661-201ENST00000384842 89 ntBASIC18.05■□□□□ 0.48
PHOX2BQ99453 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PHOX2BQ99453 AC109322.1-201ENST00000524499 1264 ntBASIC18.05■□□□□ 0.48
PHOX2BQ99453 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.05■□□□□ 0.48
PHOX2BQ99453 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.05■□□□□ 0.48
PHOX2BQ99453 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.05■□□□□ 0.48
PHOX2BQ99453 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PHOX2BQ99453 AC011467.2-201ENST00000598425 242 ntBASIC18.05■□□□□ 0.48
PHOX2BQ99453 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.05■□□□□ 0.48
PHOX2BQ99453 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
PHOX2BQ99453 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PHOX2BQ99453 AC005593.1-201ENST00000624894 515 ntBASIC18.05■□□□□ 0.48
PHOX2BQ99453 AP000867.4-201ENST00000641616 219 ntBASIC18.05■□□□□ 0.48
PHOX2BQ99453 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PHOX2BQ99453 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
PHOX2BQ99453 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.05■□□□□ 0.48
PHOX2BQ99453 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PHOX2BQ99453 AC005082.1-201ENST00000413042 2259 ntBASIC18.05■□□□□ 0.48
PHOX2BQ99453 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.04■□□□□ 0.48
PHOX2BQ99453 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PHOX2BQ99453 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.04■□□□□ 0.48
PHOX2BQ99453 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PHOX2BQ99453 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.04■□□□□ 0.48
PHOX2BQ99453 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.04■□□□□ 0.48
PHOX2BQ99453 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PHOX2BQ99453 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
PHOX2BQ99453 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PHOX2BQ99453 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.04■□□□□ 0.48
PHOX2BQ99453 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PHOX2BQ99453 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.04■□□□□ 0.48
PHOX2BQ99453 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.04■□□□□ 0.48
PHOX2BQ99453 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PHOX2BQ99453 PMS2P4-201ENST00000412466 1052 ntBASIC18.04■□□□□ 0.48
PHOX2BQ99453 AC002472.2-201ENST00000442739 958 ntBASIC18.04■□□□□ 0.48
PHOX2BQ99453 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.04■□□□□ 0.48
PHOX2BQ99453 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PHOX2BQ99453 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC18.04■□□□□ 0.48
PHOX2BQ99453 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.04■□□□□ 0.48
PHOX2BQ99453 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
PHOX2BQ99453 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.04■□□□□ 0.48
PHOX2BQ99453 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.04■□□□□ 0.48
PHOX2BQ99453 MIR3180-4-201ENST00000582223 153 ntBASIC18.04■□□□□ 0.48
PHOX2BQ99453 AC084346.2-201ENST00000607097 949 ntBASIC18.04■□□□□ 0.48
PHOX2BQ99453 CECR7-204ENST00000609932 568 ntTSL 2 BASIC18.04■□□□□ 0.48
PHOX2BQ99453 MIR6752-201ENST00000618442 71 ntBASIC18.04■□□□□ 0.48
PHOX2BQ99453 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PHOX2BQ99453 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.04■□□□□ 0.48
PHOX2BQ99453 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.04■□□□□ 0.48
PHOX2BQ99453 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PHOX2BQ99453 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PHOX2BQ99453 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
PHOX2BQ99453 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
PHOX2BQ99453 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PHOX2BQ99453 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.03■□□□□ 0.48
PHOX2BQ99453 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.03■□□□□ 0.48
PHOX2BQ99453 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PHOX2BQ99453 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PHOX2BQ99453 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms