Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 ANKRD20A8P-203ENST00000641373 517 ntBASIC21.21■□□□□ 0.99
NEK1Q96PY6 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC21.21■□□□□ 0.99
NEK1Q96PY6 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NEK1Q96PY6 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NEK1Q96PY6 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
NEK1Q96PY6 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NEK1Q96PY6 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC21.21■□□□□ 0.99
NEK1Q96PY6 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NEK1Q96PY6 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
NEK1Q96PY6 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NEK1Q96PY6 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
NEK1Q96PY6 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC21.2■□□□□ 0.98
NEK1Q96PY6 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
NEK1Q96PY6 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
NEK1Q96PY6 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
NEK1Q96PY6 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NEK1Q96PY6 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
NEK1Q96PY6 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
NEK1Q96PY6 MTCL1P1-201ENST00000446207 792 ntBASIC21.2■□□□□ 0.98
NEK1Q96PY6 NDUFV2-AS1-203ENST00000608008 779 ntBASIC21.2■□□□□ 0.98
NEK1Q96PY6 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NEK1Q96PY6 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NEK1Q96PY6 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
NEK1Q96PY6 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NEK1Q96PY6 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC21.2■□□□□ 0.98
NEK1Q96PY6 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
NEK1Q96PY6 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC21.19■□□□□ 0.98
NEK1Q96PY6 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
NEK1Q96PY6 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NEK1Q96PY6 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
NEK1Q96PY6 EML3-217ENST00000531557 2509 ntTSL 5 BASIC21.19■□□□□ 0.98
NEK1Q96PY6 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
NEK1Q96PY6 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC21.19■□□□□ 0.98
NEK1Q96PY6 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NEK1Q96PY6 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
NEK1Q96PY6 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NEK1Q96PY6 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NEK1Q96PY6 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
NEK1Q96PY6 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC21.19■□□□□ 0.98
NEK1Q96PY6 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC21.19■□□□□ 0.98
NEK1Q96PY6 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NEK1Q96PY6 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC21.19■□□□□ 0.98
NEK1Q96PY6 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC21.19■□□□□ 0.98
NEK1Q96PY6 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NEK1Q96PY6 AC116407.2-201ENST00000613639 860 ntBASIC21.19■□□□□ 0.98
NEK1Q96PY6 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NEK1Q96PY6 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
NEK1Q96PY6 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC21.19■□□□□ 0.98
NEK1Q96PY6 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
NEK1Q96PY6 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NEK1Q96PY6 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NEK1Q96PY6 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NEK1Q96PY6 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC21.18■□□□□ 0.98
NEK1Q96PY6 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NEK1Q96PY6 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NEK1Q96PY6 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
NEK1Q96PY6 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
NEK1Q96PY6 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC21.18■□□□□ 0.98
NEK1Q96PY6 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC21.18■□□□□ 0.98
NEK1Q96PY6 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC21.18■□□□□ 0.98
NEK1Q96PY6 AL121956.5-201ENST00000625261 221 ntBASIC21.18■□□□□ 0.98
NEK1Q96PY6 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC21.18■□□□□ 0.98
NEK1Q96PY6 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NEK1Q96PY6 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NEK1Q96PY6 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NEK1Q96PY6 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NEK1Q96PY6 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
NEK1Q96PY6 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
NEK1Q96PY6 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC21.18■□□□□ 0.98
NEK1Q96PY6 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
NEK1Q96PY6 BCL2-203ENST00000589955 5011 ntBASIC21.18■□□□□ 0.98
NEK1Q96PY6 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
NEK1Q96PY6 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NEK1Q96PY6 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
NEK1Q96PY6 FST-202ENST00000396947 2538 ntTSL 5 BASIC21.17■□□□□ 0.98
NEK1Q96PY6 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NEK1Q96PY6 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
NEK1Q96PY6 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NEK1Q96PY6 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NEK1Q96PY6 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NEK1Q96PY6 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC21.17■□□□□ 0.98
NEK1Q96PY6 TSPY22P-201ENST00000427496 604 ntBASIC21.17■□□□□ 0.98
NEK1Q96PY6 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
NEK1Q96PY6 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
NEK1Q96PY6 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC21.17■□□□□ 0.98
NEK1Q96PY6 AC011498.5-201ENST00000592027 486 ntBASIC21.17■□□□□ 0.98
NEK1Q96PY6 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC21.17■□□□□ 0.98
NEK1Q96PY6 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
NEK1Q96PY6 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NEK1Q96PY6 MED29-202ENST00000594368 1471 ntTSL 2 BASIC21.17■□□□□ 0.98
NEK1Q96PY6 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC21.17■□□□□ 0.98
NEK1Q96PY6 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
NEK1Q96PY6 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC21.17■□□□□ 0.98
NEK1Q96PY6 AL355312.1-201ENST00000407115 2176 ntBASIC21.17■□□□□ 0.98
NEK1Q96PY6 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NEK1Q96PY6 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
NEK1Q96PY6 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NEK1Q96PY6 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NEK1Q96PY6 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
NEK1Q96PY6 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms