Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.07■□□□□ 0.32
CNTNAP3BQ96NU0 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.07■□□□□ 0.32
CNTNAP3BQ96NU0 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CNTNAP3BQ96NU0 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.07■□□□□ 0.32
CNTNAP3BQ96NU0 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.07■□□□□ 0.32
CNTNAP3BQ96NU0 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNTNAP3BQ96NU0 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CNTNAP3BQ96NU0 AC073621.1-201ENST00000392730 636 ntBASIC17.07■□□□□ 0.32
CNTNAP3BQ96NU0 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNTNAP3BQ96NU0 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.07■□□□□ 0.32
CNTNAP3BQ96NU0 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.07■□□□□ 0.32
CNTNAP3BQ96NU0 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.07■□□□□ 0.32
CNTNAP3BQ96NU0 FAM58CP-201ENST00000435741 640 ntBASIC17.07■□□□□ 0.32
CNTNAP3BQ96NU0 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.07■□□□□ 0.32
CNTNAP3BQ96NU0 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.07■□□□□ 0.32
CNTNAP3BQ96NU0 IGHV3-71-201ENST00000523324 359 ntBASIC17.07■□□□□ 0.32
CNTNAP3BQ96NU0 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CNTNAP3BQ96NU0 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
CNTNAP3BQ96NU0 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.07■□□□□ 0.32
CNTNAP3BQ96NU0 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.07■□□□□ 0.32
CNTNAP3BQ96NU0 MIR3180-4-201ENST00000582223 153 ntBASIC17.07■□□□□ 0.32
CNTNAP3BQ96NU0 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNTNAP3BQ96NU0 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.07■□□□□ 0.32
CNTNAP3BQ96NU0 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.07■□□□□ 0.32
CNTNAP3BQ96NU0 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNTNAP3BQ96NU0 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CNTNAP3BQ96NU0 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNTNAP3BQ96NU0 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNTNAP3BQ96NU0 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNTNAP3BQ96NU0 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.07■□□□□ 0.32
CNTNAP3BQ96NU0 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.07■□□□□ 0.32
CNTNAP3BQ96NU0 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNTNAP3BQ96NU0 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNTNAP3BQ96NU0 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNTNAP3BQ96NU0 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNTNAP3BQ96NU0 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CNTNAP3BQ96NU0 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNTNAP3BQ96NU0 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNTNAP3BQ96NU0 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.06■□□□□ 0.32
CNTNAP3BQ96NU0 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CNTNAP3BQ96NU0 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNTNAP3BQ96NU0 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.06■□□□□ 0.32
CNTNAP3BQ96NU0 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CNTNAP3BQ96NU0 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNTNAP3BQ96NU0 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.06■□□□□ 0.32
CNTNAP3BQ96NU0 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC17.06■□□□□ 0.32
CNTNAP3BQ96NU0 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CNTNAP3BQ96NU0 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CNTNAP3BQ96NU0 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
CNTNAP3BQ96NU0 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNTNAP3BQ96NU0 AC055876.3-201ENST00000431496 288 ntBASIC17.06■□□□□ 0.32
CNTNAP3BQ96NU0 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CNTNAP3BQ96NU0 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.06■□□□□ 0.32
CNTNAP3BQ96NU0 CRB3P1-201ENST00000449338 276 ntBASIC17.06■□□□□ 0.32
CNTNAP3BQ96NU0 AC023141.5-201ENST00000458585 616 ntBASIC17.06■□□□□ 0.32
CNTNAP3BQ96NU0 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CNTNAP3BQ96NU0 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.06■□□□□ 0.32
CNTNAP3BQ96NU0 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CNTNAP3BQ96NU0 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.06■□□□□ 0.32
CNTNAP3BQ96NU0 AC138649.4-201ENST00000612222 287 ntBASIC17.06■□□□□ 0.32
CNTNAP3BQ96NU0 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNTNAP3BQ96NU0 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNTNAP3BQ96NU0 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.06■□□□□ 0.32
CNTNAP3BQ96NU0 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CNTNAP3BQ96NU0 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CNTNAP3BQ96NU0 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.06■□□□□ 0.32
CNTNAP3BQ96NU0 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CNTNAP3BQ96NU0 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNTNAP3BQ96NU0 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CNTNAP3BQ96NU0 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CNTNAP3BQ96NU0 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNTNAP3BQ96NU0 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNTNAP3BQ96NU0 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CNTNAP3BQ96NU0 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CNTNAP3BQ96NU0 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.05■□□□□ 0.32
CNTNAP3BQ96NU0 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CNTNAP3BQ96NU0 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CNTNAP3BQ96NU0 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.05■□□□□ 0.32
CNTNAP3BQ96NU0 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
CNTNAP3BQ96NU0 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNTNAP3BQ96NU0 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC17.05■□□□□ 0.32
CNTNAP3BQ96NU0 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNTNAP3BQ96NU0 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.05■□□□□ 0.32
CNTNAP3BQ96NU0 AC004945.1-201ENST00000416738 983 ntBASIC17.05■□□□□ 0.32
CNTNAP3BQ96NU0 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNTNAP3BQ96NU0 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.05■□□□□ 0.32
CNTNAP3BQ96NU0 AC136632.2-201ENST00000512891 861 ntBASIC17.05■□□□□ 0.32
CNTNAP3BQ96NU0 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.05■□□□□ 0.32
CNTNAP3BQ96NU0 MIR4751-201ENST00000578027 74 ntBASIC17.05■□□□□ 0.32
CNTNAP3BQ96NU0 AC006557.2-201ENST00000592985 1240 ntBASIC17.05■□□□□ 0.32
CNTNAP3BQ96NU0 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.05■□□□□ 0.32
CNTNAP3BQ96NU0 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.05■□□□□ 0.32
CNTNAP3BQ96NU0 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNTNAP3BQ96NU0 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.05■□□□□ 0.32
CNTNAP3BQ96NU0 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CNTNAP3BQ96NU0 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNTNAP3BQ96NU0 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.05■□□□□ 0.32
CNTNAP3BQ96NU0 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNTNAP3BQ96NU0 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.05■□□□□ 0.32
CNTNAP3BQ96NU0 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms