Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF558Q96NG5 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
ZNF558Q96NG5 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF558Q96NG5 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
ZNF558Q96NG5 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
ZNF558Q96NG5 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.94■□□□□ 0.62
ZNF558Q96NG5 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF558Q96NG5 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF558Q96NG5 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF558Q96NG5 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF558Q96NG5 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF558Q96NG5 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.94■□□□□ 0.62
ZNF558Q96NG5 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.94■□□□□ 0.62
ZNF558Q96NG5 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF558Q96NG5 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
ZNF558Q96NG5 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF558Q96NG5 SIRPAP1-201ENST00000448467 1770 ntBASIC18.94■□□□□ 0.62
ZNF558Q96NG5 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF558Q96NG5 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF558Q96NG5 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.94■□□□□ 0.62
ZNF558Q96NG5 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF558Q96NG5 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
ZNF558Q96NG5 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF558Q96NG5 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF558Q96NG5 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.94■□□□□ 0.62
ZNF558Q96NG5 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.94■□□□□ 0.62
ZNF558Q96NG5 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.94■□□□□ 0.62
ZNF558Q96NG5 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.94■□□□□ 0.62
ZNF558Q96NG5 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.94■□□□□ 0.62
ZNF558Q96NG5 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.94■□□□□ 0.62
ZNF558Q96NG5 MTDHP5-201ENST00000598980 586 ntBASIC18.94■□□□□ 0.62
ZNF558Q96NG5 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF558Q96NG5 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
ZNF558Q96NG5 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF558Q96NG5 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF558Q96NG5 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
ZNF558Q96NG5 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
ZNF558Q96NG5 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF558Q96NG5 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF558Q96NG5 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
ZNF558Q96NG5 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF558Q96NG5 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF558Q96NG5 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF558Q96NG5 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF558Q96NG5 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF558Q96NG5 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.93■□□□□ 0.62
ZNF558Q96NG5 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF558Q96NG5 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.93■□□□□ 0.62
ZNF558Q96NG5 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF558Q96NG5 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF558Q96NG5 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.93■□□□□ 0.62
ZNF558Q96NG5 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF558Q96NG5 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF558Q96NG5 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
ZNF558Q96NG5 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF558Q96NG5 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
ZNF558Q96NG5 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.93■□□□□ 0.62
ZNF558Q96NG5 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.93■□□□□ 0.62
ZNF558Q96NG5 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.93■□□□□ 0.62
ZNF558Q96NG5 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.93■□□□□ 0.62
ZNF558Q96NG5 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.93■□□□□ 0.62
ZNF558Q96NG5 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF558Q96NG5 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.93■□□□□ 0.62
ZNF558Q96NG5 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.93■□□□□ 0.62
ZNF558Q96NG5 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.93■□□□□ 0.62
ZNF558Q96NG5 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF558Q96NG5 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF558Q96NG5 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF558Q96NG5 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF558Q96NG5 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF558Q96NG5 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF558Q96NG5 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF558Q96NG5 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
ZNF558Q96NG5 AL353593.2-201ENST00000602529 1483 ntBASIC18.92■□□□□ 0.62
ZNF558Q96NG5 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.92■□□□□ 0.62
ZNF558Q96NG5 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF558Q96NG5 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.92■□□□□ 0.62
ZNF558Q96NG5 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
ZNF558Q96NG5 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF558Q96NG5 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF558Q96NG5 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF558Q96NG5 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.92■□□□□ 0.62
ZNF558Q96NG5 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF558Q96NG5 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.92■□□□□ 0.62
ZNF558Q96NG5 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.92■□□□□ 0.62
ZNF558Q96NG5 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.92■□□□□ 0.62
ZNF558Q96NG5 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.92■□□□□ 0.62
ZNF558Q96NG5 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.92■□□□□ 0.62
ZNF558Q96NG5 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
ZNF558Q96NG5 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF558Q96NG5 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.92■□□□□ 0.62
ZNF558Q96NG5 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.92■□□□□ 0.62
ZNF558Q96NG5 AC004706.3-202ENST00000621574 984 ntBASIC18.92■□□□□ 0.62
ZNF558Q96NG5 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.92■□□□□ 0.62
ZNF558Q96NG5 AC134684.3-201ENST00000641758 218 ntBASIC18.92■□□□□ 0.62
ZNF558Q96NG5 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF558Q96NG5 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
ZNF558Q96NG5 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF558Q96NG5 AC073592.3-201ENST00000625118 1834 ntBASIC18.92■□□□□ 0.62
ZNF558Q96NG5 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms