Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.56□□□□□ -0.08
ZNF48Q96MX3 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.56□□□□□ -0.08
ZNF48Q96MX3 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC14.56□□□□□ -0.08
ZNF48Q96MX3 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC14.56□□□□□ -0.08
ZNF48Q96MX3 KRT18P67-201ENST00000432816 1264 ntBASIC14.56□□□□□ -0.08
ZNF48Q96MX3 SLC25A1P1-201ENST00000528351 927 ntBASIC14.56□□□□□ -0.08
ZNF48Q96MX3 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.56□□□□□ -0.08
ZNF48Q96MX3 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
ZNF48Q96MX3 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC14.56□□□□□ -0.08
ZNF48Q96MX3 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF48Q96MX3 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.56□□□□□ -0.08
ZNF48Q96MX3 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.56□□□□□ -0.08
ZNF48Q96MX3 AF228730.7-201ENST00000641842 219 ntBASIC14.56□□□□□ -0.08
ZNF48Q96MX3 IL9RP2-201ENST00000423948 1312 ntBASIC14.56□□□□□ -0.08
ZNF48Q96MX3 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF48Q96MX3 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC14.56□□□□□ -0.08
ZNF48Q96MX3 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF48Q96MX3 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF48Q96MX3 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.56□□□□□ -0.08
ZNF48Q96MX3 AL390961.4-201ENST00000623958 2535 ntBASIC14.56□□□□□ -0.08
ZNF48Q96MX3 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF48Q96MX3 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF48Q96MX3 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF48Q96MX3 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF48Q96MX3 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF48Q96MX3 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF48Q96MX3 AC104581.1-202ENST00000635932 2618 ntBASIC14.55□□□□□ -0.08
ZNF48Q96MX3 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF48Q96MX3 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF48Q96MX3 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF48Q96MX3 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC14.55□□□□□ -0.08
ZNF48Q96MX3 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF48Q96MX3 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF48Q96MX3 LINC00602-201ENST00000629776 2065 ntBASIC14.55□□□□□ -0.08
ZNF48Q96MX3 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF48Q96MX3 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF48Q96MX3 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF48Q96MX3 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.55□□□□□ -0.08
ZNF48Q96MX3 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF48Q96MX3 AL031284.1-201ENST00000419297 478 ntBASIC14.55□□□□□ -0.08
ZNF48Q96MX3 MTCL1P1-201ENST00000446207 792 ntBASIC14.55□□□□□ -0.08
ZNF48Q96MX3 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.55□□□□□ -0.08
ZNF48Q96MX3 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF48Q96MX3 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
ZNF48Q96MX3 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.55□□□□□ -0.08
ZNF48Q96MX3 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.55□□□□□ -0.08
ZNF48Q96MX3 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.55□□□□□ -0.08
ZNF48Q96MX3 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.55□□□□□ -0.08
ZNF48Q96MX3 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF48Q96MX3 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF48Q96MX3 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF48Q96MX3 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF48Q96MX3 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF48Q96MX3 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF48Q96MX3 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
ZNF48Q96MX3 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC14.55□□□□□ -0.08
ZNF48Q96MX3 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF48Q96MX3 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF48Q96MX3 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF48Q96MX3 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC14.55□□□□□ -0.08
ZNF48Q96MX3 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
ZNF48Q96MX3 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF48Q96MX3 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
ZNF48Q96MX3 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC14.55□□□□□ -0.08
ZNF48Q96MX3 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF48Q96MX3 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF48Q96MX3 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF48Q96MX3 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF48Q96MX3 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF48Q96MX3 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF48Q96MX3 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.54□□□□□ -0.08
ZNF48Q96MX3 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF48Q96MX3 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
ZNF48Q96MX3 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.54□□□□□ -0.08
ZNF48Q96MX3 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.54□□□□□ -0.08
ZNF48Q96MX3 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF48Q96MX3 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
ZNF48Q96MX3 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.54□□□□□ -0.08
ZNF48Q96MX3 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
ZNF48Q96MX3 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
ZNF48Q96MX3 AF186996.4-201ENST00000467186 377 ntBASIC14.54□□□□□ -0.08
ZNF48Q96MX3 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.54□□□□□ -0.08
ZNF48Q96MX3 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC14.54□□□□□ -0.08
ZNF48Q96MX3 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.54□□□□□ -0.08
ZNF48Q96MX3 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14.54□□□□□ -0.08
ZNF48Q96MX3 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.54□□□□□ -0.08
ZNF48Q96MX3 AC009154.2-201ENST00000621177 724 ntBASIC14.54□□□□□ -0.08
ZNF48Q96MX3 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
ZNF48Q96MX3 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC14.54□□□□□ -0.08
ZNF48Q96MX3 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF48Q96MX3 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.54□□□□□ -0.08
ZNF48Q96MX3 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF48Q96MX3 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF48Q96MX3 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF48Q96MX3 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
ZNF48Q96MX3 AC126763.1-201ENST00000552015 2118 ntBASIC14.54□□□□□ -0.08
ZNF48Q96MX3 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC14.54□□□□□ -0.08
ZNF48Q96MX3 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF48Q96MX3 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF48Q96MX3 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms