Protein–RNA interactions for Protein: Q8ND07

BBOF1, Basal body-orientation factor 1, humanhuman

Predictions only

Length 529 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBOF1Q8ND07 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.42■□□□□ 0.54
BBOF1Q8ND07 AC116562.4-202ENST00000641738 218 ntBASIC18.42■□□□□ 0.54
BBOF1Q8ND07 AL049637.2-201ENST00000641778 930 ntBASIC18.42■□□□□ 0.54
BBOF1Q8ND07 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.42■□□□□ 0.54
BBOF1Q8ND07 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
BBOF1Q8ND07 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BBOF1Q8ND07 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
BBOF1Q8ND07 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
BBOF1Q8ND07 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
BBOF1Q8ND07 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
BBOF1Q8ND07 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BBOF1Q8ND07 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
BBOF1Q8ND07 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.42■□□□□ 0.54
BBOF1Q8ND07 CROCCP2-202ENST00000412962 2773 ntBASIC18.42■□□□□ 0.54
BBOF1Q8ND07 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.41■□□□□ 0.54
BBOF1Q8ND07 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.41■□□□□ 0.54
BBOF1Q8ND07 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.41■□□□□ 0.54
BBOF1Q8ND07 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
BBOF1Q8ND07 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
BBOF1Q8ND07 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BBOF1Q8ND07 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.41■□□□□ 0.54
BBOF1Q8ND07 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
BBOF1Q8ND07 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BBOF1Q8ND07 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BBOF1Q8ND07 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BBOF1Q8ND07 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
BBOF1Q8ND07 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BBOF1Q8ND07 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BBOF1Q8ND07 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BBOF1Q8ND07 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
BBOF1Q8ND07 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
BBOF1Q8ND07 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
BBOF1Q8ND07 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.41■□□□□ 0.54
BBOF1Q8ND07 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BBOF1Q8ND07 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
BBOF1Q8ND07 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.41■□□□□ 0.54
BBOF1Q8ND07 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
BBOF1Q8ND07 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.41■□□□□ 0.54
BBOF1Q8ND07 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.41■□□□□ 0.54
BBOF1Q8ND07 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.41■□□□□ 0.54
BBOF1Q8ND07 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.41■□□□□ 0.54
BBOF1Q8ND07 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.41■□□□□ 0.54
BBOF1Q8ND07 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
BBOF1Q8ND07 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
BBOF1Q8ND07 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
BBOF1Q8ND07 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
BBOF1Q8ND07 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
BBOF1Q8ND07 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BBOF1Q8ND07 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
BBOF1Q8ND07 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
BBOF1Q8ND07 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
BBOF1Q8ND07 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BBOF1Q8ND07 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
BBOF1Q8ND07 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BBOF1Q8ND07 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BBOF1Q8ND07 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
BBOF1Q8ND07 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BBOF1Q8ND07 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BBOF1Q8ND07 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.4■□□□□ 0.54
BBOF1Q8ND07 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BBOF1Q8ND07 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
BBOF1Q8ND07 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BBOF1Q8ND07 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BBOF1Q8ND07 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BBOF1Q8ND07 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BBOF1Q8ND07 UNC93B2-201ENST00000285383 730 ntBASIC18.4■□□□□ 0.54
BBOF1Q8ND07 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BBOF1Q8ND07 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.4■□□□□ 0.54
BBOF1Q8ND07 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BBOF1Q8ND07 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.4■□□□□ 0.54
BBOF1Q8ND07 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.4■□□□□ 0.54
BBOF1Q8ND07 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
BBOF1Q8ND07 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BBOF1Q8ND07 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
BBOF1Q8ND07 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
BBOF1Q8ND07 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.4■□□□□ 0.54
BBOF1Q8ND07 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
BBOF1Q8ND07 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BBOF1Q8ND07 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BBOF1Q8ND07 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.4■□□□□ 0.54
BBOF1Q8ND07 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BBOF1Q8ND07 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.4■□□□□ 0.54
BBOF1Q8ND07 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.4■□□□□ 0.54
BBOF1Q8ND07 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.4■□□□□ 0.54
BBOF1Q8ND07 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
BBOF1Q8ND07 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BBOF1Q8ND07 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BBOF1Q8ND07 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
BBOF1Q8ND07 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.39■□□□□ 0.54
BBOF1Q8ND07 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.39■□□□□ 0.54
BBOF1Q8ND07 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
BBOF1Q8ND07 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BBOF1Q8ND07 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.39■□□□□ 0.53
BBOF1Q8ND07 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BBOF1Q8ND07 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BBOF1Q8ND07 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BBOF1Q8ND07 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
BBOF1Q8ND07 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
BBOF1Q8ND07 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
BBOF1Q8ND07 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms