Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PHTF2Q8N3S3 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.52■□□□□ 0.56
PHTF2Q8N3S3 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.52■□□□□ 0.56
PHTF2Q8N3S3 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PHTF2Q8N3S3 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
PHTF2Q8N3S3 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.52■□□□□ 0.56
PHTF2Q8N3S3 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
PHTF2Q8N3S3 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
PHTF2Q8N3S3 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.52■□□□□ 0.55
PHTF2Q8N3S3 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PHTF2Q8N3S3 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.52■□□□□ 0.55
PHTF2Q8N3S3 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PHTF2Q8N3S3 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PHTF2Q8N3S3 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.51■□□□□ 0.55
PHTF2Q8N3S3 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
PHTF2Q8N3S3 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PHTF2Q8N3S3 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
PHTF2Q8N3S3 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.51■□□□□ 0.55
PHTF2Q8N3S3 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
PHTF2Q8N3S3 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.51■□□□□ 0.55
PHTF2Q8N3S3 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PHTF2Q8N3S3 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PHTF2Q8N3S3 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PHTF2Q8N3S3 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PHTF2Q8N3S3 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.51■□□□□ 0.55
PHTF2Q8N3S3 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.51■□□□□ 0.55
PHTF2Q8N3S3 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.51■□□□□ 0.55
PHTF2Q8N3S3 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PHTF2Q8N3S3 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.51■□□□□ 0.55
PHTF2Q8N3S3 AC096582.2-201ENST00000510860 516 ntBASIC18.51■□□□□ 0.55
PHTF2Q8N3S3 RNA5SP419-201ENST00000515908 135 ntBASIC18.51■□□□□ 0.55
PHTF2Q8N3S3 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.51■□□□□ 0.55
PHTF2Q8N3S3 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
PHTF2Q8N3S3 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.51■□□□□ 0.55
PHTF2Q8N3S3 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
PHTF2Q8N3S3 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PHTF2Q8N3S3 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.51■□□□□ 0.55
PHTF2Q8N3S3 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
PHTF2Q8N3S3 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PHTF2Q8N3S3 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PHTF2Q8N3S3 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.51■□□□□ 0.55
PHTF2Q8N3S3 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PHTF2Q8N3S3 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.51■□□□□ 0.55
PHTF2Q8N3S3 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PHTF2Q8N3S3 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.51■□□□□ 0.55
PHTF2Q8N3S3 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.51■□□□□ 0.55
PHTF2Q8N3S3 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.51■□□□□ 0.55
PHTF2Q8N3S3 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PHTF2Q8N3S3 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.5■□□□□ 0.55
PHTF2Q8N3S3 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
PHTF2Q8N3S3 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.5■□□□□ 0.55
PHTF2Q8N3S3 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PHTF2Q8N3S3 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.5■□□□□ 0.55
PHTF2Q8N3S3 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.5■□□□□ 0.55
PHTF2Q8N3S3 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.5■□□□□ 0.55
PHTF2Q8N3S3 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PHTF2Q8N3S3 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PHTF2Q8N3S3 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PHTF2Q8N3S3 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PHTF2Q8N3S3 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PHTF2Q8N3S3 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
PHTF2Q8N3S3 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.5■□□□□ 0.55
PHTF2Q8N3S3 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.5■□□□□ 0.55
PHTF2Q8N3S3 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.5■□□□□ 0.55
PHTF2Q8N3S3 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.5■□□□□ 0.55
PHTF2Q8N3S3 AL591684.3-201ENST00000605187 298 ntBASIC18.5■□□□□ 0.55
PHTF2Q8N3S3 AC009154.2-201ENST00000621177 724 ntBASIC18.5■□□□□ 0.55
PHTF2Q8N3S3 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PHTF2Q8N3S3 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.5■□□□□ 0.55
PHTF2Q8N3S3 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PHTF2Q8N3S3 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
PHTF2Q8N3S3 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PHTF2Q8N3S3 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PHTF2Q8N3S3 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
PHTF2Q8N3S3 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PHTF2Q8N3S3 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.5■□□□□ 0.55
PHTF2Q8N3S3 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PHTF2Q8N3S3 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PHTF2Q8N3S3 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PHTF2Q8N3S3 ABALON-201ENST00000629058 1903 ntBASIC18.49■□□□□ 0.55
PHTF2Q8N3S3 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PHTF2Q8N3S3 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PHTF2Q8N3S3 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.49■□□□□ 0.55
PHTF2Q8N3S3 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PHTF2Q8N3S3 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.49■□□□□ 0.55
PHTF2Q8N3S3 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PHTF2Q8N3S3 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PHTF2Q8N3S3 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PHTF2Q8N3S3 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PHTF2Q8N3S3 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.49■□□□□ 0.55
PHTF2Q8N3S3 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.49■□□□□ 0.55
PHTF2Q8N3S3 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.49■□□□□ 0.55
PHTF2Q8N3S3 RCN1P2-201ENST00000398357 915 ntBASIC18.49■□□□□ 0.55
PHTF2Q8N3S3 AL022342.1-201ENST00000400363 863 ntBASIC18.49■□□□□ 0.55
PHTF2Q8N3S3 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.49■□□□□ 0.55
PHTF2Q8N3S3 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PHTF2Q8N3S3 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PHTF2Q8N3S3 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.49■□□□□ 0.55
PHTF2Q8N3S3 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.49■□□□□ 0.55
PHTF2Q8N3S3 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms