Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01561Q8N1V8 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01561Q8N1V8 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01561Q8N1V8 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01561Q8N1V8 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01561Q8N1V8 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
LINC01561Q8N1V8 KRT18P29-201ENST00000397031 1267 ntBASIC12.04□□□□□ -0.48
LINC01561Q8N1V8 AL355355.2-201ENST00000442321 338 ntBASIC12.04□□□□□ -0.48
LINC01561Q8N1V8 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC12.04□□□□□ -0.48
LINC01561Q8N1V8 AC113404.2-201ENST00000507884 177 ntBASIC12.04□□□□□ -0.48
LINC01561Q8N1V8 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC12.04□□□□□ -0.48
LINC01561Q8N1V8 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC12.04□□□□□ -0.48
LINC01561Q8N1V8 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01561Q8N1V8 REXO1L10P-201ENST00000615707 1290 ntBASIC12.04□□□□□ -0.48
LINC01561Q8N1V8 REXO1L12P-201ENST00000622156 912 ntBASIC12.04□□□□□ -0.48
LINC01561Q8N1V8 AC116562.4-202ENST00000641738 218 ntBASIC12.04□□□□□ -0.48
LINC01561Q8N1V8 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC12.04□□□□□ -0.48
LINC01561Q8N1V8 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01561Q8N1V8 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01561Q8N1V8 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01561Q8N1V8 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01561Q8N1V8 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01561Q8N1V8 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01561Q8N1V8 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01561Q8N1V8 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC12.04□□□□□ -0.48
LINC01561Q8N1V8 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
LINC01561Q8N1V8 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01561Q8N1V8 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01561Q8N1V8 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC12.04□□□□□ -0.48
LINC01561Q8N1V8 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
LINC01561Q8N1V8 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
LINC01561Q8N1V8 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01561Q8N1V8 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01561Q8N1V8 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC12.04□□□□□ -0.48
LINC01561Q8N1V8 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01561Q8N1V8 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01561Q8N1V8 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
LINC01561Q8N1V8 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC12.03□□□□□ -0.48
LINC01561Q8N1V8 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01561Q8N1V8 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC12.03□□□□□ -0.48
LINC01561Q8N1V8 AC132938.6-201ENST00000623828 1655 ntBASIC12.03□□□□□ -0.48
LINC01561Q8N1V8 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01561Q8N1V8 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC12.03□□□□□ -0.48
LINC01561Q8N1V8 AC092338.2-201ENST00000568827 1415 ntBASIC12.03□□□□□ -0.48
LINC01561Q8N1V8 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC12.03□□□□□ -0.48
LINC01561Q8N1V8 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
LINC01561Q8N1V8 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01561Q8N1V8 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01561Q8N1V8 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01561Q8N1V8 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
LINC01561Q8N1V8 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01561Q8N1V8 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01561Q8N1V8 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01561Q8N1V8 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01561Q8N1V8 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01561Q8N1V8 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01561Q8N1V8 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01561Q8N1V8 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC12.03□□□□□ -0.48
LINC01561Q8N1V8 RPS2P55-201ENST00000397318 883 ntBASIC12.03□□□□□ -0.48
LINC01561Q8N1V8 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01561Q8N1V8 GXYLT1P6-201ENST00000456472 1187 ntBASIC12.03□□□□□ -0.48
LINC01561Q8N1V8 AC107956.1-201ENST00000494359 873 ntBASIC12.03□□□□□ -0.48
LINC01561Q8N1V8 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC12.03□□□□□ -0.48
LINC01561Q8N1V8 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC12.03□□□□□ -0.48
LINC01561Q8N1V8 AL512604.3-201ENST00000569583 964 ntBASIC12.03□□□□□ -0.48
LINC01561Q8N1V8 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC12.03□□□□□ -0.48
LINC01561Q8N1V8 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01561Q8N1V8 BOC-212ENST00000485230 2173 ntTSL 2 BASIC12.03□□□□□ -0.48
LINC01561Q8N1V8 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01561Q8N1V8 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01561Q8N1V8 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
LINC01561Q8N1V8 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
LINC01561Q8N1V8 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC12.03□□□□□ -0.48
LINC01561Q8N1V8 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01561Q8N1V8 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01561Q8N1V8 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01561Q8N1V8 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01561Q8N1V8 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
LINC01561Q8N1V8 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01561Q8N1V8 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC12.03□□□□□ -0.48
LINC01561Q8N1V8 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC12.03□□□□□ -0.48
LINC01561Q8N1V8 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
LINC01561Q8N1V8 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC12.03□□□□□ -0.48
LINC01561Q8N1V8 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC12.03□□□□□ -0.48
LINC01561Q8N1V8 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01561Q8N1V8 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01561Q8N1V8 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
LINC01561Q8N1V8 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
LINC01561Q8N1V8 AP001094.4-201ENST00000579008 2176 ntBASIC12.02□□□□□ -0.48
LINC01561Q8N1V8 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
LINC01561Q8N1V8 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC12.02□□□□□ -0.48
LINC01561Q8N1V8 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
LINC01561Q8N1V8 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
LINC01561Q8N1V8 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC01561Q8N1V8 AD000864.1-201ENST00000624076 2295 ntBASIC12.02□□□□□ -0.49
LINC01561Q8N1V8 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
LINC01561Q8N1V8 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC01561Q8N1V8 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC01561Q8N1V8 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
LINC01561Q8N1V8 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC12.02□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms