Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
XRN1Q8IZH2 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
XRN1Q8IZH2 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
XRN1Q8IZH2 WBP2-203ENST00000433525 928 ntTSL 2 BASIC24.64■■□□□ 1.54
XRN1Q8IZH2 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
XRN1Q8IZH2 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC24.64■■□□□ 1.54
XRN1Q8IZH2 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
XRN1Q8IZH2 CYB561-216ENST00000582297 897 ntTSL 3 BASIC24.64■■□□□ 1.54
XRN1Q8IZH2 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
XRN1Q8IZH2 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC24.64■■□□□ 1.54
XRN1Q8IZH2 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
XRN1Q8IZH2 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
XRN1Q8IZH2 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
XRN1Q8IZH2 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.53
XRN1Q8IZH2 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC24.64■■□□□ 1.53
XRN1Q8IZH2 AC092919.2-201ENST00000623631 1645 ntBASIC24.64■■□□□ 1.53
XRN1Q8IZH2 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC24.64■■□□□ 1.53
XRN1Q8IZH2 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.53
XRN1Q8IZH2 PTCHD3P3-201ENST00000403073 906 ntBASIC24.64■■□□□ 1.53
XRN1Q8IZH2 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC24.64■■□□□ 1.53
XRN1Q8IZH2 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC24.64■■□□□ 1.53
XRN1Q8IZH2 GGTLC5P-201ENST00000617623 998 ntBASIC24.64■■□□□ 1.53
XRN1Q8IZH2 AC105339.1-204ENST00000636249 355 ntBASIC24.64■■□□□ 1.53
XRN1Q8IZH2 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC24.63■■□□□ 1.53
XRN1Q8IZH2 AC025580.3-201ENST00000617932 1424 ntBASIC24.63■■□□□ 1.53
XRN1Q8IZH2 SP100-208ENST00000427101 1922 ntTSL 2 BASIC24.63■■□□□ 1.53
XRN1Q8IZH2 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC24.63■■□□□ 1.53
XRN1Q8IZH2 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
XRN1Q8IZH2 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC24.63■■□□□ 1.53
XRN1Q8IZH2 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
XRN1Q8IZH2 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC24.63■■□□□ 1.53
XRN1Q8IZH2 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
XRN1Q8IZH2 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC24.63■■□□□ 1.53
XRN1Q8IZH2 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC24.63■■□□□ 1.53
XRN1Q8IZH2 MED16-214ENST00000617672 554 ntTSL 5 BASIC24.63■■□□□ 1.53
XRN1Q8IZH2 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC24.63■■□□□ 1.53
XRN1Q8IZH2 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC24.63■■□□□ 1.53
XRN1Q8IZH2 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
XRN1Q8IZH2 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC24.63■■□□□ 1.53
XRN1Q8IZH2 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
XRN1Q8IZH2 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC24.63■■□□□ 1.53
XRN1Q8IZH2 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC24.62■■□□□ 1.53
XRN1Q8IZH2 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC24.62■■□□□ 1.53
XRN1Q8IZH2 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC24.62■■□□□ 1.53
XRN1Q8IZH2 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
XRN1Q8IZH2 AC006116.8-202ENST00000587620 1550 ntBASIC24.62■■□□□ 1.53
XRN1Q8IZH2 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
XRN1Q8IZH2 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
XRN1Q8IZH2 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC24.62■■□□□ 1.53
XRN1Q8IZH2 AC093520.2-201ENST00000561830 333 ntBASIC24.62■■□□□ 1.53
XRN1Q8IZH2 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
XRN1Q8IZH2 AC109462.3-201ENST00000573934 613 ntBASIC24.62■■□□□ 1.53
XRN1Q8IZH2 AC099522.2-201ENST00000607001 744 ntBASIC24.62■■□□□ 1.53
XRN1Q8IZH2 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
XRN1Q8IZH2 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
XRN1Q8IZH2 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
XRN1Q8IZH2 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
XRN1Q8IZH2 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
XRN1Q8IZH2 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
XRN1Q8IZH2 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
XRN1Q8IZH2 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC24.61■■□□□ 1.53
XRN1Q8IZH2 AC015911.4-201ENST00000588022 1070 ntBASIC24.61■■□□□ 1.53
XRN1Q8IZH2 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
XRN1Q8IZH2 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
XRN1Q8IZH2 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC24.61■■□□□ 1.53
XRN1Q8IZH2 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
XRN1Q8IZH2 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC24.61■■□□□ 1.53
XRN1Q8IZH2 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
XRN1Q8IZH2 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
XRN1Q8IZH2 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC24.61■■□□□ 1.53
XRN1Q8IZH2 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC24.61■■□□□ 1.53
XRN1Q8IZH2 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
XRN1Q8IZH2 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
XRN1Q8IZH2 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC24.61■■□□□ 1.53
XRN1Q8IZH2 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC24.61■■□□□ 1.53
XRN1Q8IZH2 ACTG1P4-201ENST00000425123 1122 ntBASIC24.61■■□□□ 1.53
XRN1Q8IZH2 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC24.61■■□□□ 1.53
XRN1Q8IZH2 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC24.61■■□□□ 1.53
XRN1Q8IZH2 AC074386.1-202ENST00000463561 864 ntBASIC24.61■■□□□ 1.53
XRN1Q8IZH2 SLBP-205ENST00000488267 987 ntTSL 2 BASIC24.61■■□□□ 1.53
XRN1Q8IZH2 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC24.61■■□□□ 1.53
XRN1Q8IZH2 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
XRN1Q8IZH2 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC24.61■■□□□ 1.53
XRN1Q8IZH2 AC004835.2-201ENST00000603762 682 ntBASIC24.61■■□□□ 1.53
XRN1Q8IZH2 AC023141.13-201ENST00000604991 943 ntBASIC24.61■■□□□ 1.53
XRN1Q8IZH2 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
XRN1Q8IZH2 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
XRN1Q8IZH2 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
XRN1Q8IZH2 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
XRN1Q8IZH2 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
XRN1Q8IZH2 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
XRN1Q8IZH2 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC24.6■■□□□ 1.53
XRN1Q8IZH2 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
XRN1Q8IZH2 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC24.6■■□□□ 1.53
XRN1Q8IZH2 STK19B-204ENST00000512515 211 ntBASIC24.6■■□□□ 1.53
XRN1Q8IZH2 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC24.6■■□□□ 1.53
XRN1Q8IZH2 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
XRN1Q8IZH2 TMED1-207ENST00000591695 809 ntTSL 5 BASIC24.6■■□□□ 1.53
XRN1Q8IZH2 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC24.6■■□□□ 1.53
XRN1Q8IZH2 AJ011932.1-201ENST00000621707 465 ntBASIC24.6■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms