Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC50Q8IVM0 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC50Q8IVM0 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC50Q8IVM0 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC50Q8IVM0 KRT8P9-201ENST00000558927 1449 ntBASIC18.94■□□□□ 0.62
CCDC50Q8IVM0 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC50Q8IVM0 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC50Q8IVM0 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC50Q8IVM0 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC50Q8IVM0 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC50Q8IVM0 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CCDC50Q8IVM0 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC50Q8IVM0 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC50Q8IVM0 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC50Q8IVM0 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.94■□□□□ 0.62
CCDC50Q8IVM0 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC50Q8IVM0 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC50Q8IVM0 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC50Q8IVM0 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC50Q8IVM0 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC50Q8IVM0 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC50Q8IVM0 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC50Q8IVM0 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CCDC50Q8IVM0 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC50Q8IVM0 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC50Q8IVM0 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CCDC50Q8IVM0 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
CCDC50Q8IVM0 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CCDC50Q8IVM0 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC50Q8IVM0 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC50Q8IVM0 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC50Q8IVM0 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC50Q8IVM0 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC50Q8IVM0 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC50Q8IVM0 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CCDC50Q8IVM0 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.93■□□□□ 0.62
CCDC50Q8IVM0 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.93■□□□□ 0.62
CCDC50Q8IVM0 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC50Q8IVM0 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC50Q8IVM0 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC50Q8IVM0 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.93■□□□□ 0.62
CCDC50Q8IVM0 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.93■□□□□ 0.62
CCDC50Q8IVM0 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CCDC50Q8IVM0 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.93■□□□□ 0.62
CCDC50Q8IVM0 PCDHA12-202ENST00000613593 2588 ntBASIC18.93■□□□□ 0.62
CCDC50Q8IVM0 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC50Q8IVM0 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CCDC50Q8IVM0 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC50Q8IVM0 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CCDC50Q8IVM0 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC50Q8IVM0 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC50Q8IVM0 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC50Q8IVM0 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC50Q8IVM0 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC50Q8IVM0 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC50Q8IVM0 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC50Q8IVM0 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC50Q8IVM0 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC50Q8IVM0 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC50Q8IVM0 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC50Q8IVM0 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
CCDC50Q8IVM0 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC50Q8IVM0 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC50Q8IVM0 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC50Q8IVM0 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC50Q8IVM0 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC50Q8IVM0 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CCDC50Q8IVM0 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.92■□□□□ 0.62
CCDC50Q8IVM0 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC50Q8IVM0 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CCDC50Q8IVM0 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
CCDC50Q8IVM0 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC50Q8IVM0 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC50Q8IVM0 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.92■□□□□ 0.62
CCDC50Q8IVM0 AC010947.1-201ENST00000623454 693 ntBASIC18.92■□□□□ 0.62
CCDC50Q8IVM0 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.92■□□□□ 0.62
CCDC50Q8IVM0 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC50Q8IVM0 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC50Q8IVM0 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC50Q8IVM0 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CCDC50Q8IVM0 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CCDC50Q8IVM0 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CCDC50Q8IVM0 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC50Q8IVM0 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CCDC50Q8IVM0 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC50Q8IVM0 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC50Q8IVM0 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC50Q8IVM0 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC50Q8IVM0 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC50Q8IVM0 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC50Q8IVM0 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC50Q8IVM0 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC50Q8IVM0 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC50Q8IVM0 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC50Q8IVM0 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC50Q8IVM0 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC50Q8IVM0 MMP23A-201ENST00000234610 1017 ntBASIC18.91■□□□□ 0.62
CCDC50Q8IVM0 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC50Q8IVM0 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CCDC50Q8IVM0 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms