Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRTM4Q86VH4 KRT18P31-201ENST00000506277 1292 ntBASIC17.56■□□□□ 0.4
LRRTM4Q86VH4 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.56■□□□□ 0.4
LRRTM4Q86VH4 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.56■□□□□ 0.4
LRRTM4Q86VH4 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.56■□□□□ 0.4
LRRTM4Q86VH4 AC111152.3-201ENST00000569699 673 ntBASIC17.56■□□□□ 0.4
LRRTM4Q86VH4 LINC01711-201ENST00000598340 967 ntBASIC17.56■□□□□ 0.4
LRRTM4Q86VH4 AL732292.2-201ENST00000609649 430 ntBASIC17.56■□□□□ 0.4
LRRTM4Q86VH4 AC116407.2-201ENST00000613639 860 ntBASIC17.56■□□□□ 0.4
LRRTM4Q86VH4 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.56■□□□□ 0.4
LRRTM4Q86VH4 AC114341.1-201ENST00000618070 349 ntBASIC17.56■□□□□ 0.4
LRRTM4Q86VH4 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.56■□□□□ 0.4
LRRTM4Q86VH4 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRTM4Q86VH4 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRTM4Q86VH4 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.56■□□□□ 0.4
LRRTM4Q86VH4 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRTM4Q86VH4 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRTM4Q86VH4 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRTM4Q86VH4 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
LRRTM4Q86VH4 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
LRRTM4Q86VH4 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRTM4Q86VH4 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.56■□□□□ 0.4
LRRTM4Q86VH4 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
LRRTM4Q86VH4 AC138028.4-201ENST00000564984 1845 ntBASIC17.56■□□□□ 0.4
LRRTM4Q86VH4 TP73-AS1-210ENST00000637775 1455 ntBASIC17.56■□□□□ 0.4
LRRTM4Q86VH4 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
LRRTM4Q86VH4 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRTM4Q86VH4 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.55■□□□□ 0.4
LRRTM4Q86VH4 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRTM4Q86VH4 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRRTM4Q86VH4 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRTM4Q86VH4 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.55■□□□□ 0.4
LRRTM4Q86VH4 AC097374.2-201ENST00000618617 1306 ntBASIC17.55■□□□□ 0.4
LRRTM4Q86VH4 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRTM4Q86VH4 AL354751.1-201ENST00000412768 1863 ntBASIC17.55■□□□□ 0.4
LRRTM4Q86VH4 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
LRRTM4Q86VH4 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.55■□□□□ 0.4
LRRTM4Q86VH4 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRTM4Q86VH4 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.55■□□□□ 0.4
LRRTM4Q86VH4 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRRTM4Q86VH4 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.55■□□□□ 0.4
LRRTM4Q86VH4 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.55■□□□□ 0.4
LRRTM4Q86VH4 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.55■□□□□ 0.4
LRRTM4Q86VH4 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.55■□□□□ 0.4
LRRTM4Q86VH4 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.55■□□□□ 0.4
LRRTM4Q86VH4 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.55■□□□□ 0.4
LRRTM4Q86VH4 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
LRRTM4Q86VH4 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.55■□□□□ 0.4
LRRTM4Q86VH4 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.55■□□□□ 0.4
LRRTM4Q86VH4 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
LRRTM4Q86VH4 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRRTM4Q86VH4 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRTM4Q86VH4 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.55■□□□□ 0.4
LRRTM4Q86VH4 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
LRRTM4Q86VH4 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRTM4Q86VH4 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.55■□□□□ 0.4
LRRTM4Q86VH4 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
LRRTM4Q86VH4 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRRTM4Q86VH4 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
LRRTM4Q86VH4 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRTM4Q86VH4 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.55■□□□□ 0.4
LRRTM4Q86VH4 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRTM4Q86VH4 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRRTM4Q86VH4 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.55■□□□□ 0.4
LRRTM4Q86VH4 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.54■□□□□ 0.4
LRRTM4Q86VH4 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRTM4Q86VH4 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRRTM4Q86VH4 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
LRRTM4Q86VH4 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
LRRTM4Q86VH4 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.54■□□□□ 0.4
LRRTM4Q86VH4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRTM4Q86VH4 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRTM4Q86VH4 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRTM4Q86VH4 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRRTM4Q86VH4 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRTM4Q86VH4 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.54■□□□□ 0.4
LRRTM4Q86VH4 AC090340.1-201ENST00000620778 4980 ntBASIC17.54■□□□□ 0.4
LRRTM4Q86VH4 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRRTM4Q86VH4 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRTM4Q86VH4 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRTM4Q86VH4 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.54■□□□□ 0.4
LRRTM4Q86VH4 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
LRRTM4Q86VH4 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRTM4Q86VH4 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRTM4Q86VH4 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRRTM4Q86VH4 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.54■□□□□ 0.4
LRRTM4Q86VH4 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
LRRTM4Q86VH4 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRTM4Q86VH4 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.54■□□□□ 0.4
LRRTM4Q86VH4 AL691432.3-201ENST00000621860 400 ntBASIC17.54■□□□□ 0.4
LRRTM4Q86VH4 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.54■□□□□ 0.4
LRRTM4Q86VH4 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.54■□□□□ 0.4
LRRTM4Q86VH4 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.54■□□□□ 0.4
LRRTM4Q86VH4 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRTM4Q86VH4 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRTM4Q86VH4 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRTM4Q86VH4 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.54■□□□□ 0.4
LRRTM4Q86VH4 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
LRRTM4Q86VH4 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.54■□□□□ 0.4
LRRTM4Q86VH4 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms