Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CSMD3Q7Z407 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CSMD3Q7Z407 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
CSMD3Q7Z407 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC12.37□□□□□ -0.43
CSMD3Q7Z407 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
CSMD3Q7Z407 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC12.37□□□□□ -0.43
CSMD3Q7Z407 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC12.37□□□□□ -0.43
CSMD3Q7Z407 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CSMD3Q7Z407 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC12.37□□□□□ -0.43
CSMD3Q7Z407 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC12.37□□□□□ -0.43
CSMD3Q7Z407 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC12.37□□□□□ -0.43
CSMD3Q7Z407 DUX4L17-201ENST00000557360 1267 ntBASIC12.37□□□□□ -0.43
CSMD3Q7Z407 RN7SL204P-201ENST00000582831 262 ntBASIC12.37□□□□□ -0.43
CSMD3Q7Z407 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CSMD3Q7Z407 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CSMD3Q7Z407 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC12.37□□□□□ -0.43
CSMD3Q7Z407 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CSMD3Q7Z407 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CSMD3Q7Z407 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
CSMD3Q7Z407 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CSMD3Q7Z407 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CSMD3Q7Z407 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CSMD3Q7Z407 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC12.37□□□□□ -0.43
CSMD3Q7Z407 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
CSMD3Q7Z407 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC12.37□□□□□ -0.43
CSMD3Q7Z407 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
CSMD3Q7Z407 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC12.37□□□□□ -0.43
CSMD3Q7Z407 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CSMD3Q7Z407 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CSMD3Q7Z407 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
CSMD3Q7Z407 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CSMD3Q7Z407 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CSMD3Q7Z407 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CSMD3Q7Z407 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC12.36□□□□□ -0.43
CSMD3Q7Z407 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CSMD3Q7Z407 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC12.36□□□□□ -0.43
CSMD3Q7Z407 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CSMD3Q7Z407 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CSMD3Q7Z407 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC12.36□□□□□ -0.43
CSMD3Q7Z407 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CSMD3Q7Z407 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CSMD3Q7Z407 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CSMD3Q7Z407 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CSMD3Q7Z407 AC092474.2-201ENST00000424288 719 ntBASIC12.36□□□□□ -0.43
CSMD3Q7Z407 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC12.36□□□□□ -0.43
CSMD3Q7Z407 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC12.36□□□□□ -0.43
CSMD3Q7Z407 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC12.36□□□□□ -0.43
CSMD3Q7Z407 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CSMD3Q7Z407 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CSMD3Q7Z407 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC12.36□□□□□ -0.43
CSMD3Q7Z407 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
CSMD3Q7Z407 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
CSMD3Q7Z407 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
CSMD3Q7Z407 AC100803.2-201ENST00000562459 1963 ntBASIC12.36□□□□□ -0.43
CSMD3Q7Z407 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC12.36□□□□□ -0.43
CSMD3Q7Z407 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC12.36□□□□□ -0.43
CSMD3Q7Z407 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CSMD3Q7Z407 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC12.36□□□□□ -0.43
CSMD3Q7Z407 AC004877.2-201ENST00000623941 599 ntBASIC12.36□□□□□ -0.43
CSMD3Q7Z407 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CSMD3Q7Z407 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CSMD3Q7Z407 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC12.36□□□□□ -0.43
CSMD3Q7Z407 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CSMD3Q7Z407 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CSMD3Q7Z407 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
CSMD3Q7Z407 SLC4A1APP2-201ENST00000424054 1259 ntBASIC12.36□□□□□ -0.43
CSMD3Q7Z407 SIGLEC30P-201ENST00000455569 941 ntBASIC12.36□□□□□ -0.43
CSMD3Q7Z407 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC12.36□□□□□ -0.43
CSMD3Q7Z407 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC12.36□□□□□ -0.43
CSMD3Q7Z407 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CSMD3Q7Z407 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CSMD3Q7Z407 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
CSMD3Q7Z407 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CSMD3Q7Z407 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
CSMD3Q7Z407 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CSMD3Q7Z407 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CSMD3Q7Z407 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
CSMD3Q7Z407 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CSMD3Q7Z407 CD99-202ENST00000381180 530 ntTSL 2 BASIC12.35□□□□□ -0.43
CSMD3Q7Z407 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC12.35□□□□□ -0.43
CSMD3Q7Z407 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
CSMD3Q7Z407 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC12.35□□□□□ -0.43
CSMD3Q7Z407 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC12.35□□□□□ -0.43
CSMD3Q7Z407 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC12.35□□□□□ -0.43
CSMD3Q7Z407 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC12.35□□□□□ -0.43
CSMD3Q7Z407 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CSMD3Q7Z407 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC12.35□□□□□ -0.43
CSMD3Q7Z407 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CSMD3Q7Z407 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CSMD3Q7Z407 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC12.35□□□□□ -0.43
CSMD3Q7Z407 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
CSMD3Q7Z407 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CSMD3Q7Z407 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC12.35□□□□□ -0.43
CSMD3Q7Z407 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CSMD3Q7Z407 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC12.35□□□□□ -0.43
CSMD3Q7Z407 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC12.35□□□□□ -0.43
CSMD3Q7Z407 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC12.35□□□□□ -0.43
CSMD3Q7Z407 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC12.35□□□□□ -0.43
CSMD3Q7Z407 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC12.35□□□□□ -0.43
CSMD3Q7Z407 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms