Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C9orf139Q6ZV77 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
C9orf139Q6ZV77 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.44□□□□□ -0.1
C9orf139Q6ZV77 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
C9orf139Q6ZV77 AC096633.1-201ENST00000422446 749 ntBASIC14.44□□□□□ -0.1
C9orf139Q6ZV77 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.44□□□□□ -0.1
C9orf139Q6ZV77 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.44□□□□□ -0.1
C9orf139Q6ZV77 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
C9orf139Q6ZV77 MIR7706-201ENST00000613747 67 ntBASIC14.44□□□□□ -0.1
C9orf139Q6ZV77 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.44□□□□□ -0.1
C9orf139Q6ZV77 AF228730.7-201ENST00000641842 219 ntBASIC14.44□□□□□ -0.1
C9orf139Q6ZV77 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
C9orf139Q6ZV77 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C9orf139Q6ZV77 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
C9orf139Q6ZV77 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C9orf139Q6ZV77 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC14.44□□□□□ -0.1
C9orf139Q6ZV77 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
C9orf139Q6ZV77 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C9orf139Q6ZV77 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
C9orf139Q6ZV77 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
C9orf139Q6ZV77 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC14.44□□□□□ -0.1
C9orf139Q6ZV77 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC14.44□□□□□ -0.1
C9orf139Q6ZV77 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
C9orf139Q6ZV77 HTR7P1-202ENST00000624664 4411 ntBASIC14.44□□□□□ -0.1
C9orf139Q6ZV77 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
C9orf139Q6ZV77 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
C9orf139Q6ZV77 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
C9orf139Q6ZV77 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
C9orf139Q6ZV77 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
C9orf139Q6ZV77 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
C9orf139Q6ZV77 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
C9orf139Q6ZV77 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
C9orf139Q6ZV77 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
C9orf139Q6ZV77 AL356309.3-201ENST00000624132 1934 ntBASIC14.43□□□□□ -0.1
C9orf139Q6ZV77 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
C9orf139Q6ZV77 AC132938.6-201ENST00000623828 1655 ntBASIC14.43□□□□□ -0.1
C9orf139Q6ZV77 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
C9orf139Q6ZV77 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
C9orf139Q6ZV77 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
C9orf139Q6ZV77 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
C9orf139Q6ZV77 TBC1D3P5-201ENST00000579401 1545 ntBASIC14.43□□□□□ -0.1
C9orf139Q6ZV77 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
C9orf139Q6ZV77 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
C9orf139Q6ZV77 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
C9orf139Q6ZV77 MIR574-201ENST00000385209 96 ntBASIC14.43□□□□□ -0.1
C9orf139Q6ZV77 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
C9orf139Q6ZV77 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.43□□□□□ -0.1
C9orf139Q6ZV77 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.43□□□□□ -0.1
C9orf139Q6ZV77 AC106730.1-201ENST00000566722 1090 ntBASIC14.43□□□□□ -0.1
C9orf139Q6ZV77 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.43□□□□□ -0.1
C9orf139Q6ZV77 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
C9orf139Q6ZV77 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.43□□□□□ -0.1
C9orf139Q6ZV77 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.43□□□□□ -0.1
C9orf139Q6ZV77 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.43□□□□□ -0.1
C9orf139Q6ZV77 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
C9orf139Q6ZV77 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
C9orf139Q6ZV77 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
C9orf139Q6ZV77 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
C9orf139Q6ZV77 AC243591.1-201ENST00000452967 1364 ntBASIC14.43□□□□□ -0.1
C9orf139Q6ZV77 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
C9orf139Q6ZV77 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
C9orf139Q6ZV77 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.43□□□□□ -0.1
C9orf139Q6ZV77 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC14.42□□□□□ -0.1
C9orf139Q6ZV77 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC14.42□□□□□ -0.1
C9orf139Q6ZV77 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC14.42□□□□□ -0.1
C9orf139Q6ZV77 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
C9orf139Q6ZV77 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
C9orf139Q6ZV77 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
C9orf139Q6ZV77 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC14.42□□□□□ -0.1
C9orf139Q6ZV77 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
C9orf139Q6ZV77 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
C9orf139Q6ZV77 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
C9orf139Q6ZV77 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
C9orf139Q6ZV77 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC14.42□□□□□ -0.1
C9orf139Q6ZV77 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC14.42□□□□□ -0.1
C9orf139Q6ZV77 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
C9orf139Q6ZV77 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC14.42□□□□□ -0.1
C9orf139Q6ZV77 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
C9orf139Q6ZV77 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
C9orf139Q6ZV77 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
C9orf139Q6ZV77 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.42□□□□□ -0.1
C9orf139Q6ZV77 AC122714.2-201ENST00000502787 707 ntBASIC14.42□□□□□ -0.1
C9orf139Q6ZV77 DUTP2-201ENST00000519164 463 ntBASIC14.42□□□□□ -0.1
C9orf139Q6ZV77 KRT18P58-201ENST00000527480 1120 ntBASIC14.42□□□□□ -0.1
C9orf139Q6ZV77 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.42□□□□□ -0.1
C9orf139Q6ZV77 AC021087.4-201ENST00000563761 564 ntBASIC14.42□□□□□ -0.1
C9orf139Q6ZV77 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.42□□□□□ -0.1
C9orf139Q6ZV77 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
C9orf139Q6ZV77 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
C9orf139Q6ZV77 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
C9orf139Q6ZV77 AP000867.4-201ENST00000641616 219 ntBASIC14.42□□□□□ -0.1
C9orf139Q6ZV77 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
C9orf139Q6ZV77 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
C9orf139Q6ZV77 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
C9orf139Q6ZV77 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
C9orf139Q6ZV77 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
C9orf139Q6ZV77 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
C9orf139Q6ZV77 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
C9orf139Q6ZV77 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC14.42□□□□□ -0.1
C9orf139Q6ZV77 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms