Protein–RNA interactions for Protein: Q6Q0C0

TRAF7, E3 ubiquitin-protein ligase TRAF7, humanhuman

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF7Q6Q0C0 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAF7Q6Q0C0 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRAF7Q6Q0C0 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAF7Q6Q0C0 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAF7Q6Q0C0 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.42■□□□□ 0.7
TRAF7Q6Q0C0 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAF7Q6Q0C0 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.42■□□□□ 0.7
TRAF7Q6Q0C0 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
TRAF7Q6Q0C0 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRAF7Q6Q0C0 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.42■□□□□ 0.7
TRAF7Q6Q0C0 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.42■□□□□ 0.7
TRAF7Q6Q0C0 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.42■□□□□ 0.7
TRAF7Q6Q0C0 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAF7Q6Q0C0 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.42■□□□□ 0.7
TRAF7Q6Q0C0 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.42■□□□□ 0.7
TRAF7Q6Q0C0 AL355385.1-201ENST00000606123 409 ntBASIC19.42■□□□□ 0.7
TRAF7Q6Q0C0 MIR1199-201ENST00000621445 119 ntBASIC19.42■□□□□ 0.7
TRAF7Q6Q0C0 AC004706.3-202ENST00000621574 984 ntBASIC19.42■□□□□ 0.7
TRAF7Q6Q0C0 PGM5P2-202ENST00000637225 1043 ntBASIC19.42■□□□□ 0.7
TRAF7Q6Q0C0 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.42■□□□□ 0.7
TRAF7Q6Q0C0 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAF7Q6Q0C0 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.42■□□□□ 0.7
TRAF7Q6Q0C0 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAF7Q6Q0C0 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.42■□□□□ 0.7
TRAF7Q6Q0C0 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.42■□□□□ 0.7
TRAF7Q6Q0C0 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAF7Q6Q0C0 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
TRAF7Q6Q0C0 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.42■□□□□ 0.7
TRAF7Q6Q0C0 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.42■□□□□ 0.7
TRAF7Q6Q0C0 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRAF7Q6Q0C0 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.41■□□□□ 0.7
TRAF7Q6Q0C0 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAF7Q6Q0C0 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.41■□□□□ 0.7
TRAF7Q6Q0C0 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAF7Q6Q0C0 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
TRAF7Q6Q0C0 AL049757.1-201ENST00000616842 1596 ntBASIC19.41■□□□□ 0.7
TRAF7Q6Q0C0 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAF7Q6Q0C0 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.41■□□□□ 0.7
TRAF7Q6Q0C0 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAF7Q6Q0C0 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAF7Q6Q0C0 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TRAF7Q6Q0C0 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAF7Q6Q0C0 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.41■□□□□ 0.7
TRAF7Q6Q0C0 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAF7Q6Q0C0 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TRAF7Q6Q0C0 ELK2BP-201ENST00000415014 1224 ntBASIC19.41■□□□□ 0.7
TRAF7Q6Q0C0 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.41■□□□□ 0.7
TRAF7Q6Q0C0 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
TRAF7Q6Q0C0 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRAF7Q6Q0C0 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.41■□□□□ 0.7
TRAF7Q6Q0C0 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.41■□□□□ 0.7
TRAF7Q6Q0C0 AC027796.2-201ENST00000575326 344 ntBASIC19.41■□□□□ 0.7
TRAF7Q6Q0C0 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.41■□□□□ 0.7
TRAF7Q6Q0C0 AL589182.2-201ENST00000619332 1049 ntBASIC19.41■□□□□ 0.7
TRAF7Q6Q0C0 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAF7Q6Q0C0 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAF7Q6Q0C0 AC132938.5-201ENST00000624980 1813 ntBASIC19.41■□□□□ 0.7
TRAF7Q6Q0C0 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.41■□□□□ 0.7
TRAF7Q6Q0C0 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.41■□□□□ 0.7
TRAF7Q6Q0C0 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TRAF7Q6Q0C0 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAF7Q6Q0C0 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAF7Q6Q0C0 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRAF7Q6Q0C0 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.41■□□□□ 0.7
TRAF7Q6Q0C0 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAF7Q6Q0C0 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAF7Q6Q0C0 AC006504.4-201ENST00000592118 1568 ntBASIC19.4■□□□□ 0.7
TRAF7Q6Q0C0 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAF7Q6Q0C0 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.4■□□□□ 0.7
TRAF7Q6Q0C0 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAF7Q6Q0C0 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAF7Q6Q0C0 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TRAF7Q6Q0C0 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAF7Q6Q0C0 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TRAF7Q6Q0C0 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAF7Q6Q0C0 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRAF7Q6Q0C0 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAF7Q6Q0C0 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TRAF7Q6Q0C0 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.4■□□□□ 0.7
TRAF7Q6Q0C0 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.4■□□□□ 0.7
TRAF7Q6Q0C0 MCCD1P2-201ENST00000423228 335 ntBASIC19.4■□□□□ 0.7
TRAF7Q6Q0C0 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.4■□□□□ 0.7
TRAF7Q6Q0C0 AC103564.2-201ENST00000432853 1299 ntBASIC19.4■□□□□ 0.7
TRAF7Q6Q0C0 DNAJB3-202ENST00000449667 1266 ntBASIC19.4■□□□□ 0.7
TRAF7Q6Q0C0 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.4■□□□□ 0.7
TRAF7Q6Q0C0 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.4■□□□□ 0.7
TRAF7Q6Q0C0 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC19.4■□□□□ 0.7
TRAF7Q6Q0C0 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.4■□□□□ 0.7
TRAF7Q6Q0C0 MTDHP5-201ENST00000598980 586 ntBASIC19.4■□□□□ 0.7
TRAF7Q6Q0C0 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAF7Q6Q0C0 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRAF7Q6Q0C0 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAF7Q6Q0C0 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.4■□□□□ 0.7
TRAF7Q6Q0C0 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAF7Q6Q0C0 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAF7Q6Q0C0 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAF7Q6Q0C0 AC148477.5-201ENST00000625164 1645 ntBASIC19.4■□□□□ 0.7
TRAF7Q6Q0C0 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAF7Q6Q0C0 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
TRAF7Q6Q0C0 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms