Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RTL6Q6ICC9 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
RTL6Q6ICC9 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RTL6Q6ICC9 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RTL6Q6ICC9 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RTL6Q6ICC9 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RTL6Q6ICC9 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RTL6Q6ICC9 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.18■□□□□ 0.18
RTL6Q6ICC9 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RTL6Q6ICC9 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.17■□□□□ 0.18
RTL6Q6ICC9 AC104581.1-202ENST00000635932 2618 ntBASIC16.17■□□□□ 0.18
RTL6Q6ICC9 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RTL6Q6ICC9 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.17■□□□□ 0.18
RTL6Q6ICC9 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RTL6Q6ICC9 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RTL6Q6ICC9 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RTL6Q6ICC9 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RTL6Q6ICC9 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RTL6Q6ICC9 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RTL6Q6ICC9 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RTL6Q6ICC9 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RTL6Q6ICC9 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RTL6Q6ICC9 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.17■□□□□ 0.18
RTL6Q6ICC9 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.17■□□□□ 0.18
RTL6Q6ICC9 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.17■□□□□ 0.18
RTL6Q6ICC9 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.17■□□□□ 0.18
RTL6Q6ICC9 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RTL6Q6ICC9 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
RTL6Q6ICC9 MIR5100-201ENST00000579544 119 ntBASIC16.17■□□□□ 0.18
RTL6Q6ICC9 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.17■□□□□ 0.18
RTL6Q6ICC9 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.17■□□□□ 0.18
RTL6Q6ICC9 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.17■□□□□ 0.18
RTL6Q6ICC9 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
RTL6Q6ICC9 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RTL6Q6ICC9 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RTL6Q6ICC9 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.17■□□□□ 0.18
RTL6Q6ICC9 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RTL6Q6ICC9 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.17■□□□□ 0.18
RTL6Q6ICC9 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RTL6Q6ICC9 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RTL6Q6ICC9 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RTL6Q6ICC9 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.16■□□□□ 0.18
RTL6Q6ICC9 AL354751.1-201ENST00000412768 1863 ntBASIC16.16■□□□□ 0.18
RTL6Q6ICC9 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RTL6Q6ICC9 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RTL6Q6ICC9 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.16■□□□□ 0.18
RTL6Q6ICC9 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RTL6Q6ICC9 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.16■□□□□ 0.18
RTL6Q6ICC9 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RTL6Q6ICC9 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.16■□□□□ 0.18
RTL6Q6ICC9 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RTL6Q6ICC9 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.16■□□□□ 0.18
RTL6Q6ICC9 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.16■□□□□ 0.18
RTL6Q6ICC9 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.16■□□□□ 0.18
RTL6Q6ICC9 AL662844.1-201ENST00000546340 181 ntBASIC16.16■□□□□ 0.18
RTL6Q6ICC9 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.16■□□□□ 0.18
RTL6Q6ICC9 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.16■□□□□ 0.18
RTL6Q6ICC9 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RTL6Q6ICC9 AC005336.2-201ENST00000593183 939 ntBASIC16.16■□□□□ 0.18
RTL6Q6ICC9 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.16■□□□□ 0.18
RTL6Q6ICC9 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RTL6Q6ICC9 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RTL6Q6ICC9 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RTL6Q6ICC9 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.16■□□□□ 0.18
RTL6Q6ICC9 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RTL6Q6ICC9 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RTL6Q6ICC9 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
RTL6Q6ICC9 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.16■□□□□ 0.18
RTL6Q6ICC9 LINC01126-201ENST00000623515 1646 ntBASIC16.16■□□□□ 0.18
RTL6Q6ICC9 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RTL6Q6ICC9 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RTL6Q6ICC9 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RTL6Q6ICC9 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.15■□□□□ 0.18
RTL6Q6ICC9 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RTL6Q6ICC9 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
RTL6Q6ICC9 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RTL6Q6ICC9 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RTL6Q6ICC9 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RTL6Q6ICC9 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RTL6Q6ICC9 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RTL6Q6ICC9 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RTL6Q6ICC9 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RTL6Q6ICC9 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
RTL6Q6ICC9 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.15■□□□□ 0.18
RTL6Q6ICC9 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RTL6Q6ICC9 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RTL6Q6ICC9 AC096582.2-201ENST00000510860 516 ntBASIC16.15■□□□□ 0.18
RTL6Q6ICC9 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.15■□□□□ 0.18
RTL6Q6ICC9 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RTL6Q6ICC9 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.15■□□□□ 0.18
RTL6Q6ICC9 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.15■□□□□ 0.18
RTL6Q6ICC9 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RTL6Q6ICC9 ANO7L1-203ENST00000602586 1720 ntBASIC16.15■□□□□ 0.18
RTL6Q6ICC9 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.15■□□□□ 0.18
RTL6Q6ICC9 AL591684.3-201ENST00000605187 298 ntBASIC16.15■□□□□ 0.18
RTL6Q6ICC9 AC114341.1-201ENST00000618070 349 ntBASIC16.15■□□□□ 0.18
RTL6Q6ICC9 TP73-AS1-207ENST00000624167 988 ntBASIC16.15■□□□□ 0.18
RTL6Q6ICC9 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.15■□□□□ 0.18
RTL6Q6ICC9 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RTL6Q6ICC9 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms