Protein–RNA interactions for Protein: Q5VXU3

CHIC1, Cysteine-rich hydrophobic domain-containing protein 1, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHIC1Q5VXU3 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC31.04■■■□□ 2.56
CHIC1Q5VXU3 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC31.04■■■□□ 2.56
CHIC1Q5VXU3 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
CHIC1Q5VXU3 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CHIC1Q5VXU3 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CHIC1Q5VXU3 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC31.03■■■□□ 2.56
CHIC1Q5VXU3 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CHIC1Q5VXU3 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC31.03■■■□□ 2.56
CHIC1Q5VXU3 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
CHIC1Q5VXU3 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC31.03■■■□□ 2.56
CHIC1Q5VXU3 AC011632.1-203ENST00000522914 454 ntTSL 3 BASIC31.03■■■□□ 2.56
CHIC1Q5VXU3 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC31.03■■■□□ 2.56
CHIC1Q5VXU3 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC31.03■■■□□ 2.56
CHIC1Q5VXU3 AP005202.1-202ENST00000583065 748 ntTSL 5 BASIC31.03■■■□□ 2.56
CHIC1Q5VXU3 TK1-205ENST00000590862 642 ntTSL 3 BASIC31.03■■■□□ 2.56
CHIC1Q5VXU3 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC31.03■■■□□ 2.56
CHIC1Q5VXU3 AC073592.7-201ENST00000623659 507 ntBASIC31.03■■■□□ 2.56
CHIC1Q5VXU3 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC31.03■■■□□ 2.56
CHIC1Q5VXU3 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC31.03■■■□□ 2.56
CHIC1Q5VXU3 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC31.03■■■□□ 2.56
CHIC1Q5VXU3 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC31.03■■■□□ 2.56
CHIC1Q5VXU3 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC31.03■■■□□ 2.56
CHIC1Q5VXU3 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC31.03■■■□□ 2.56
CHIC1Q5VXU3 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
CHIC1Q5VXU3 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CHIC1Q5VXU3 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CHIC1Q5VXU3 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC31.03■■■□□ 2.56
CHIC1Q5VXU3 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC31.03■■■□□ 2.56
CHIC1Q5VXU3 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC31.02■■■□□ 2.56
CHIC1Q5VXU3 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
CHIC1Q5VXU3 NARF-204ENST00000390006 1766 ntTSL 2 BASIC31.02■■■□□ 2.56
CHIC1Q5VXU3 KCNIP4-204ENST00000382150 1645 ntAPPRIS P3 TSL 1 (best) BASIC31.02■■■□□ 2.56
CHIC1Q5VXU3 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CHIC1Q5VXU3 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC31.02■■■□□ 2.56
CHIC1Q5VXU3 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC31.02■■■□□ 2.56
CHIC1Q5VXU3 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC31.02■■■□□ 2.56
CHIC1Q5VXU3 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC31.02■■■□□ 2.56
CHIC1Q5VXU3 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
CHIC1Q5VXU3 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC31.02■■■□□ 2.56
CHIC1Q5VXU3 ATP6V1B1-AS1-201ENST00000422761 1129 ntTSL 2 BASIC31.02■■■□□ 2.56
CHIC1Q5VXU3 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC31.02■■■□□ 2.56
CHIC1Q5VXU3 NDUFC1-206ENST00000505036 809 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CHIC1Q5VXU3 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC31.02■■■□□ 2.56
CHIC1Q5VXU3 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC31.02■■■□□ 2.56
CHIC1Q5VXU3 TDGF1-205ENST00000542931 1192 ntAPPRIS ALT2 TSL 5 BASIC31.02■■■□□ 2.56
CHIC1Q5VXU3 AC091515.1-201ENST00000548110 679 ntBASIC31.02■■■□□ 2.56
CHIC1Q5VXU3 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CHIC1Q5VXU3 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC31.02■■■□□ 2.56
CHIC1Q5VXU3 AC093424.1-201ENST00000604999 338 ntBASIC31.02■■■□□ 2.56
CHIC1Q5VXU3 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC31.02■■■□□ 2.56
CHIC1Q5VXU3 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC31.02■■■□□ 2.56
CHIC1Q5VXU3 AC091046.2-201ENST00000620775 665 ntBASIC31.02■■■□□ 2.56
CHIC1Q5VXU3 AP003072.5-201ENST00000623872 773 ntBASIC31.02■■■□□ 2.56
CHIC1Q5VXU3 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC31.02■■■□□ 2.56
CHIC1Q5VXU3 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
CHIC1Q5VXU3 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CHIC1Q5VXU3 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
CHIC1Q5VXU3 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC31.01■■■□□ 2.56
CHIC1Q5VXU3 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC31.01■■■□□ 2.56
CHIC1Q5VXU3 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
CHIC1Q5VXU3 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
CHIC1Q5VXU3 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC31.01■■■□□ 2.56
CHIC1Q5VXU3 HVCN1-209ENST00000620084 1568 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
CHIC1Q5VXU3 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC31.01■■■□□ 2.55
CHIC1Q5VXU3 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC31.01■■■□□ 2.55
CHIC1Q5VXU3 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
CHIC1Q5VXU3 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
CHIC1Q5VXU3 CCNB2P1-201ENST00000399411 1150 ntBASIC31.01■■■□□ 2.55
CHIC1Q5VXU3 MTATP6P31-201ENST00000406985 692 ntBASIC31.01■■■□□ 2.55
CHIC1Q5VXU3 AC092810.1-201ENST00000429208 1224 ntBASIC31.01■■■□□ 2.55
CHIC1Q5VXU3 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC31.01■■■□□ 2.55
CHIC1Q5VXU3 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC31.01■■■□□ 2.55
CHIC1Q5VXU3 SNORA48.9-201ENST00000516419 162 ntBASIC31.01■■■□□ 2.55
CHIC1Q5VXU3 AC022616.7-201ENST00000525383 220 ntBASIC31.01■■■□□ 2.55
CHIC1Q5VXU3 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC31.01■■■□□ 2.55
CHIC1Q5VXU3 AC020923.1-201ENST00000624021 917 ntBASIC31.01■■■□□ 2.55
CHIC1Q5VXU3 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC31.01■■■□□ 2.55
CHIC1Q5VXU3 AL583859.2-201ENST00000634462 1127 ntTSL 5 BASIC31.01■■■□□ 2.55
CHIC1Q5VXU3 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
CHIC1Q5VXU3 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
CHIC1Q5VXU3 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC31.01■■■□□ 2.55
CHIC1Q5VXU3 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
CHIC1Q5VXU3 AL096828.2-201ENST00000567259 1965 ntBASIC31.01■■■□□ 2.55
CHIC1Q5VXU3 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
CHIC1Q5VXU3 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC31.01■■■□□ 2.55
CHIC1Q5VXU3 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC31■■■□□ 2.55
CHIC1Q5VXU3 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC31■■■□□ 2.55
CHIC1Q5VXU3 SP100-208ENST00000427101 1922 ntTSL 2 BASIC31■■■□□ 2.55
CHIC1Q5VXU3 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CHIC1Q5VXU3 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC31■■■□□ 2.55
CHIC1Q5VXU3 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CHIC1Q5VXU3 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC31■■■□□ 2.55
CHIC1Q5VXU3 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC31■■■□□ 2.55
CHIC1Q5VXU3 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CHIC1Q5VXU3 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CHIC1Q5VXU3 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC31■■■□□ 2.55
CHIC1Q5VXU3 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC31■■■□□ 2.55
CHIC1Q5VXU3 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC31■■■□□ 2.55
CHIC1Q5VXU3 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC31■■■□□ 2.55
CHIC1Q5VXU3 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC31■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms