Protein–RNA interactions for Protein: Q5TDP6

LGSN, Lengsin, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGSNQ5TDP6 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LGSNQ5TDP6 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
LGSNQ5TDP6 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.07■□□□□ 0.48
LGSNQ5TDP6 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LGSNQ5TDP6 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LGSNQ5TDP6 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LGSNQ5TDP6 CCR12P-201ENST00000446203 998 ntBASIC18.07■□□□□ 0.48
LGSNQ5TDP6 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LGSNQ5TDP6 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LGSNQ5TDP6 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.07■□□□□ 0.48
LGSNQ5TDP6 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LGSNQ5TDP6 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
LGSNQ5TDP6 REXO1L10P-201ENST00000615707 1290 ntBASIC18.07■□□□□ 0.48
LGSNQ5TDP6 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LGSNQ5TDP6 REXO1L12P-201ENST00000622156 912 ntBASIC18.07■□□□□ 0.48
LGSNQ5TDP6 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
LGSNQ5TDP6 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
LGSNQ5TDP6 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
LGSNQ5TDP6 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LGSNQ5TDP6 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.07■□□□□ 0.48
LGSNQ5TDP6 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
LGSNQ5TDP6 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.07■□□□□ 0.48
LGSNQ5TDP6 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
LGSNQ5TDP6 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LGSNQ5TDP6 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LGSNQ5TDP6 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LGSNQ5TDP6 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LGSNQ5TDP6 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
LGSNQ5TDP6 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
LGSNQ5TDP6 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LGSNQ5TDP6 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LGSNQ5TDP6 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.06■□□□□ 0.48
LGSNQ5TDP6 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.06■□□□□ 0.48
LGSNQ5TDP6 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
LGSNQ5TDP6 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LGSNQ5TDP6 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.06■□□□□ 0.48
LGSNQ5TDP6 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LGSNQ5TDP6 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.06■□□□□ 0.48
LGSNQ5TDP6 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LGSNQ5TDP6 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
LGSNQ5TDP6 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.06■□□□□ 0.48
LGSNQ5TDP6 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LGSNQ5TDP6 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LGSNQ5TDP6 ABHD17AP1-201ENST00000358206 933 ntBASIC18.06■□□□□ 0.48
LGSNQ5TDP6 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LGSNQ5TDP6 RPS2P55-201ENST00000397318 883 ntBASIC18.06■□□□□ 0.48
LGSNQ5TDP6 AC107956.1-201ENST00000494359 873 ntBASIC18.06■□□□□ 0.48
LGSNQ5TDP6 BX088651.1-201ENST00000540551 451 ntBASIC18.06■□□□□ 0.48
LGSNQ5TDP6 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.06■□□□□ 0.48
LGSNQ5TDP6 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.06■□□□□ 0.48
LGSNQ5TDP6 AC116407.2-201ENST00000613639 860 ntBASIC18.06■□□□□ 0.48
LGSNQ5TDP6 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
LGSNQ5TDP6 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LGSNQ5TDP6 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LGSNQ5TDP6 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LGSNQ5TDP6 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LGSNQ5TDP6 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LGSNQ5TDP6 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LGSNQ5TDP6 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LGSNQ5TDP6 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
LGSNQ5TDP6 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LGSNQ5TDP6 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LGSNQ5TDP6 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LGSNQ5TDP6 AC080080.1-201ENST00000625121 2420 ntBASIC18.06■□□□□ 0.48
LGSNQ5TDP6 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LGSNQ5TDP6 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LGSNQ5TDP6 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.05■□□□□ 0.48
LGSNQ5TDP6 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LGSNQ5TDP6 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
LGSNQ5TDP6 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
LGSNQ5TDP6 LINC00602-201ENST00000629776 2065 ntBASIC18.05■□□□□ 0.48
LGSNQ5TDP6 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LGSNQ5TDP6 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LGSNQ5TDP6 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LGSNQ5TDP6 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
LGSNQ5TDP6 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
LGSNQ5TDP6 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.05■□□□□ 0.48
LGSNQ5TDP6 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LGSNQ5TDP6 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LGSNQ5TDP6 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.05■□□□□ 0.48
LGSNQ5TDP6 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LGSNQ5TDP6 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.05■□□□□ 0.48
LGSNQ5TDP6 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LGSNQ5TDP6 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.05■□□□□ 0.48
LGSNQ5TDP6 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
LGSNQ5TDP6 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.05■□□□□ 0.48
LGSNQ5TDP6 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LGSNQ5TDP6 AP001094.4-201ENST00000579008 2176 ntBASIC18.05■□□□□ 0.48
LGSNQ5TDP6 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LGSNQ5TDP6 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.05■□□□□ 0.48
LGSNQ5TDP6 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
LGSNQ5TDP6 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.05■□□□□ 0.48
LGSNQ5TDP6 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LGSNQ5TDP6 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LGSNQ5TDP6 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LGSNQ5TDP6 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC18.04■□□□□ 0.48
LGSNQ5TDP6 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
LGSNQ5TDP6 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
LGSNQ5TDP6 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LGSNQ5TDP6 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms