Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
HMGCS1Q01581 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCS1Q01581 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCS1Q01581 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.28■□□□□ 0.36
HMGCS1Q01581 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCS1Q01581 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.28■□□□□ 0.36
HMGCS1Q01581 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCS1Q01581 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCS1Q01581 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.28■□□□□ 0.36
HMGCS1Q01581 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCS1Q01581 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCS1Q01581 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
HMGCS1Q01581 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMGCS1Q01581 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMGCS1Q01581 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMGCS1Q01581 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMGCS1Q01581 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMGCS1Q01581 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
HMGCS1Q01581 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
HMGCS1Q01581 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HMGCS1Q01581 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMGCS1Q01581 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.27■□□□□ 0.36
HMGCS1Q01581 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.27■□□□□ 0.36
HMGCS1Q01581 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HMGCS1Q01581 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMGCS1Q01581 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMGCS1Q01581 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMGCS1Q01581 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMGCS1Q01581 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
HMGCS1Q01581 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.27■□□□□ 0.36
HMGCS1Q01581 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.27■□□□□ 0.36
HMGCS1Q01581 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.27■□□□□ 0.36
HMGCS1Q01581 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.27■□□□□ 0.36
HMGCS1Q01581 AC034232.1-201ENST00000506026 1064 ntBASIC17.27■□□□□ 0.36
HMGCS1Q01581 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.27■□□□□ 0.36
HMGCS1Q01581 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
HMGCS1Q01581 AC140113.3-201ENST00000605663 199 ntBASIC17.27■□□□□ 0.36
HMGCS1Q01581 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.27■□□□□ 0.36
HMGCS1Q01581 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMGCS1Q01581 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.27■□□□□ 0.36
HMGCS1Q01581 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
HMGCS1Q01581 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMGCS1Q01581 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
HMGCS1Q01581 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HMGCS1Q01581 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
HMGCS1Q01581 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
HMGCS1Q01581 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
HMGCS1Q01581 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HMGCS1Q01581 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.27■□□□□ 0.35
HMGCS1Q01581 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
HMGCS1Q01581 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
HMGCS1Q01581 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.27■□□□□ 0.35
HMGCS1Q01581 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
HMGCS1Q01581 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HMGCS1Q01581 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.27■□□□□ 0.35
HMGCS1Q01581 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HMGCS1Q01581 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMGCS1Q01581 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HMGCS1Q01581 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HMGCS1Q01581 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.26■□□□□ 0.35
HMGCS1Q01581 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMGCS1Q01581 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HMGCS1Q01581 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMGCS1Q01581 AC022898.2-201ENST00000616822 1312 ntBASIC17.26■□□□□ 0.35
HMGCS1Q01581 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMGCS1Q01581 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.26■□□□□ 0.35
HMGCS1Q01581 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HMGCS1Q01581 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.26■□□□□ 0.35
HMGCS1Q01581 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
HMGCS1Q01581 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
HMGCS1Q01581 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
HMGCS1Q01581 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
HMGCS1Q01581 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HMGCS1Q01581 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HMGCS1Q01581 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
HMGCS1Q01581 LIN28AP1-201ENST00000429574 405 ntBASIC17.26■□□□□ 0.35
HMGCS1Q01581 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
HMGCS1Q01581 RASA4DP-201ENST00000460726 1199 ntBASIC17.26■□□□□ 0.35
HMGCS1Q01581 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
HMGCS1Q01581 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.26■□□□□ 0.35
HMGCS1Q01581 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.26■□□□□ 0.35
HMGCS1Q01581 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.26■□□□□ 0.35
HMGCS1Q01581 AL441883.1-201ENST00000566170 1045 ntBASIC17.26■□□□□ 0.35
HMGCS1Q01581 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.26■□□□□ 0.35
HMGCS1Q01581 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMGCS1Q01581 AC079602.3-201ENST00000623931 403 ntBASIC17.26■□□□□ 0.35
HMGCS1Q01581 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMGCS1Q01581 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMGCS1Q01581 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.26■□□□□ 0.35
HMGCS1Q01581 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
HMGCS1Q01581 AC108860.2-201ENST00000562760 2183 ntBASIC17.26■□□□□ 0.35
HMGCS1Q01581 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMGCS1Q01581 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
HMGCS1Q01581 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.26■□□□□ 0.35
HMGCS1Q01581 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
HMGCS1Q01581 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.26■□□□□ 0.35
HMGCS1Q01581 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMGCS1Q01581 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMGCS1Q01581 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMGCS1Q01581 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms