Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.84■□□□□ 0.29
RAB38P57729 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RAB38P57729 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RAB38P57729 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.84■□□□□ 0.29
RAB38P57729 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB38P57729 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
RAB38P57729 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB38P57729 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB38P57729 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RAB38P57729 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB38P57729 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
RAB38P57729 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.84■□□□□ 0.29
RAB38P57729 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
RAB38P57729 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
RAB38P57729 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
RAB38P57729 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.29
RAB38P57729 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB38P57729 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB38P57729 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB38P57729 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
RAB38P57729 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB38P57729 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB38P57729 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RAB38P57729 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB38P57729 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RAB38P57729 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.83■□□□□ 0.28
RAB38P57729 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.83■□□□□ 0.28
RAB38P57729 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.83■□□□□ 0.28
RAB38P57729 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB38P57729 KRT17P6-201ENST00000453795 1220 ntBASIC16.83■□□□□ 0.28
RAB38P57729 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
RAB38P57729 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB38P57729 AC104819.1-201ENST00000504587 486 ntBASIC16.83■□□□□ 0.28
RAB38P57729 AC074051.2-201ENST00000565115 352 ntBASIC16.83■□□□□ 0.28
RAB38P57729 AC012615.1-201ENST00000565797 1299 ntBASIC16.83■□□□□ 0.28
RAB38P57729 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
RAB38P57729 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.83■□□□□ 0.28
RAB38P57729 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RAB38P57729 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.83■□□□□ 0.28
RAB38P57729 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
RAB38P57729 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB38P57729 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB38P57729 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.83■□□□□ 0.28
RAB38P57729 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.83■□□□□ 0.28
RAB38P57729 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
RAB38P57729 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.83■□□□□ 0.28
RAB38P57729 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RAB38P57729 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RAB38P57729 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB38P57729 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RAB38P57729 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.82■□□□□ 0.28
RAB38P57729 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RAB38P57729 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
RAB38P57729 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RAB38P57729 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB38P57729 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RAB38P57729 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB38P57729 AC125634.1-201ENST00000438758 1403 ntBASIC16.82■□□□□ 0.28
RAB38P57729 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.82■□□□□ 0.28
RAB38P57729 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB38P57729 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
RAB38P57729 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB38P57729 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB38P57729 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RAB38P57729 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RAB38P57729 AC096633.1-201ENST00000422446 749 ntBASIC16.82■□□□□ 0.28
RAB38P57729 DDX43P3-201ENST00000441064 443 ntBASIC16.82■□□□□ 0.28
RAB38P57729 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.82■□□□□ 0.28
RAB38P57729 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.82■□□□□ 0.28
RAB38P57729 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB38P57729 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
RAB38P57729 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.82■□□□□ 0.28
RAB38P57729 AL138831.2-201ENST00000606564 490 ntBASIC16.82■□□□□ 0.28
RAB38P57729 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.82■□□□□ 0.28
RAB38P57729 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RAB38P57729 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
RAB38P57729 AC090340.1-201ENST00000620778 4980 ntBASIC16.82■□□□□ 0.28
RAB38P57729 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RAB38P57729 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.82■□□□□ 0.28
RAB38P57729 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB38P57729 AC008764.6-201ENST00000595909 2069 ntBASIC16.82■□□□□ 0.28
RAB38P57729 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.82■□□□□ 0.28
RAB38P57729 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
RAB38P57729 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.82■□□□□ 0.28
RAB38P57729 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB38P57729 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RAB38P57729 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RAB38P57729 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB38P57729 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.82■□□□□ 0.28
RAB38P57729 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB38P57729 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB38P57729 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.81■□□□□ 0.28
RAB38P57729 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RAB38P57729 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAB38P57729 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAB38P57729 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
RAB38P57729 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB38P57729 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAB38P57729 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.81■□□□□ 0.28
RAB38P57729 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms