Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
LIM2P55344 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.01■□□□□ 0.31
LIM2P55344 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.01■□□□□ 0.31
LIM2P55344 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LIM2P55344 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LIM2P55344 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LIM2P55344 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.01■□□□□ 0.31
LIM2P55344 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.01■□□□□ 0.31
LIM2P55344 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.01■□□□□ 0.31
LIM2P55344 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
LIM2P55344 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.01■□□□□ 0.31
LIM2P55344 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LIM2P55344 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
LIM2P55344 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.01■□□□□ 0.31
LIM2P55344 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
LIM2P55344 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.01■□□□□ 0.31
LIM2P55344 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LIM2P55344 AC016734.2-201ENST00000624325 1377 ntBASIC17.01■□□□□ 0.31
LIM2P55344 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17■□□□□ 0.31
LIM2P55344 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17■□□□□ 0.31
LIM2P55344 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LIM2P55344 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17■□□□□ 0.31
LIM2P55344 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
LIM2P55344 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LIM2P55344 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
LIM2P55344 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
LIM2P55344 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17■□□□□ 0.31
LIM2P55344 SLC25A6P5-201ENST00000435663 894 ntBASIC17■□□□□ 0.31
LIM2P55344 AC068472.1-201ENST00000474589 881 ntBASIC17■□□□□ 0.31
LIM2P55344 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17■□□□□ 0.31
LIM2P55344 GUSBP12-201ENST00000513727 720 ntBASIC17■□□□□ 0.31
LIM2P55344 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17■□□□□ 0.31
LIM2P55344 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17■□□□□ 0.31
LIM2P55344 AC090616.6-201ENST00000582640 721 ntBASIC17■□□□□ 0.31
LIM2P55344 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17■□□□□ 0.31
LIM2P55344 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
LIM2P55344 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
LIM2P55344 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17■□□□□ 0.31
LIM2P55344 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17■□□□□ 0.31
LIM2P55344 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17■□□□□ 0.31
LIM2P55344 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
LIM2P55344 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LIM2P55344 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17■□□□□ 0.31
LIM2P55344 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LIM2P55344 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17■□□□□ 0.31
LIM2P55344 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LIM2P55344 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17■□□□□ 0.31
LIM2P55344 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
LIM2P55344 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17■□□□□ 0.31
LIM2P55344 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LIM2P55344 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LIM2P55344 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LIM2P55344 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
LIM2P55344 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LIM2P55344 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
LIM2P55344 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LIM2P55344 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LIM2P55344 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.99■□□□□ 0.31
LIM2P55344 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
LIM2P55344 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.99■□□□□ 0.31
LIM2P55344 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LIM2P55344 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.99■□□□□ 0.31
LIM2P55344 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.99■□□□□ 0.31
LIM2P55344 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.99■□□□□ 0.31
LIM2P55344 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LIM2P55344 IGHV3-41-201ENST00000613121 348 ntBASIC16.99■□□□□ 0.31
LIM2P55344 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.99■□□□□ 0.31
LIM2P55344 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LIM2P55344 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LIM2P55344 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LIM2P55344 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
LIM2P55344 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.99■□□□□ 0.31
LIM2P55344 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.99■□□□□ 0.31
LIM2P55344 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
LIM2P55344 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LIM2P55344 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LIM2P55344 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.99■□□□□ 0.31
LIM2P55344 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.98■□□□□ 0.31
LIM2P55344 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LIM2P55344 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
LIM2P55344 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.98■□□□□ 0.31
LIM2P55344 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LIM2P55344 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LIM2P55344 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LIM2P55344 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
LIM2P55344 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
LIM2P55344 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
LIM2P55344 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LIM2P55344 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LIM2P55344 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LIM2P55344 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
LIM2P55344 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LIM2P55344 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LIM2P55344 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.98■□□□□ 0.31
LIM2P55344 CHCHD2P8-201ENST00000429873 447 ntBASIC16.98■□□□□ 0.31
LIM2P55344 TSSC2-201ENST00000450217 709 ntBASIC16.98■□□□□ 0.31
LIM2P55344 RN7SL606P-201ENST00000472779 293 ntBASIC16.98■□□□□ 0.31
LIM2P55344 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.98■□□□□ 0.31
LIM2P55344 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LIM2P55344 AL592071.1-201ENST00000611956 408 ntBASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms