Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMSP52788 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMSP52788 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMSP52788 FLJ13224-201ENST00000313737 1514 ntBASIC16.8■□□□□ 0.28
SMSP52788 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.8■□□□□ 0.28
SMSP52788 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMSP52788 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.8■□□□□ 0.28
SMSP52788 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMSP52788 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMSP52788 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SMSP52788 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMSP52788 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMSP52788 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMSP52788 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SMSP52788 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMSP52788 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SMSP52788 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.8■□□□□ 0.28
SMSP52788 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.8■□□□□ 0.28
SMSP52788 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.8■□□□□ 0.28
SMSP52788 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMSP52788 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMSP52788 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
SMSP52788 NPAP1P7-201ENST00000613027 823 ntBASIC16.8■□□□□ 0.28
SMSP52788 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.8■□□□□ 0.28
SMSP52788 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMSP52788 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMSP52788 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMSP52788 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SMSP52788 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMSP52788 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SMSP52788 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SMSP52788 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMSP52788 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.79■□□□□ 0.28
SMSP52788 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMSP52788 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMSP52788 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
SMSP52788 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SMSP52788 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SMSP52788 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMSP52788 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SMSP52788 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SMSP52788 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SMSP52788 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMSP52788 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMSP52788 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.79■□□□□ 0.28
SMSP52788 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SMSP52788 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
SMSP52788 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMSP52788 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMSP52788 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.79■□□□□ 0.28
SMSP52788 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMSP52788 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SMSP52788 TSSC2-201ENST00000450217 709 ntBASIC16.79■□□□□ 0.28
SMSP52788 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.79■□□□□ 0.28
SMSP52788 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMSP52788 KRT18P41-201ENST00000518924 1277 ntBASIC16.79■□□□□ 0.28
SMSP52788 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.79■□□□□ 0.28
SMSP52788 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMSP52788 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SMSP52788 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMSP52788 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMSP52788 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
SMSP52788 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.79■□□□□ 0.28
SMSP52788 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMSP52788 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMSP52788 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.78■□□□□ 0.28
SMSP52788 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SMSP52788 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SMSP52788 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMSP52788 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMSP52788 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMSP52788 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
SMSP52788 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.78■□□□□ 0.28
SMSP52788 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
SMSP52788 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SMSP52788 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMSP52788 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMSP52788 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.78■□□□□ 0.28
SMSP52788 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMSP52788 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.78■□□□□ 0.28
SMSP52788 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SMSP52788 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SMSP52788 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.78■□□□□ 0.28
SMSP52788 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.78■□□□□ 0.28
SMSP52788 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.78■□□□□ 0.28
SMSP52788 AC011498.5-201ENST00000592027 486 ntBASIC16.78■□□□□ 0.28
SMSP52788 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMSP52788 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMSP52788 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
SMSP52788 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.78■□□□□ 0.28
SMSP52788 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.78■□□□□ 0.28
SMSP52788 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMSP52788 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
SMSP52788 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.78■□□□□ 0.28
SMSP52788 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMSP52788 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SMSP52788 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
SMSP52788 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMSP52788 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMSP52788 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms