Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDC34P49427 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CDC34P49427 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC14.18□□□□□ -0.14
CDC34P49427 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDC34P49427 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDC34P49427 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDC34P49427 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC14.18□□□□□ -0.14
CDC34P49427 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDC34P49427 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
CDC34P49427 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDC34P49427 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDC34P49427 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC14.17□□□□□ -0.14
CDC34P49427 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDC34P49427 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDC34P49427 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.17□□□□□ -0.14
CDC34P49427 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CDC34P49427 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CDC34P49427 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CDC34P49427 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDC34P49427 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CDC34P49427 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDC34P49427 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDC34P49427 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDC34P49427 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC14.17□□□□□ -0.14
CDC34P49427 SLC29A4P1-201ENST00000398760 971 ntBASIC14.17□□□□□ -0.14
CDC34P49427 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDC34P49427 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC14.17□□□□□ -0.14
CDC34P49427 PPP1R14BP2-201ENST00000426284 444 ntBASIC14.17□□□□□ -0.14
CDC34P49427 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CDC34P49427 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDC34P49427 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CDC34P49427 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CDC34P49427 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDC34P49427 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.17□□□□□ -0.14
CDC34P49427 UBALD1-205ENST00000590891 2641 ntBASIC14.17□□□□□ -0.14
CDC34P49427 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.17□□□□□ -0.14
CDC34P49427 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
CDC34P49427 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDC34P49427 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC14.17□□□□□ -0.14
CDC34P49427 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDC34P49427 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDC34P49427 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDC34P49427 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.17□□□□□ -0.14
CDC34P49427 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDC34P49427 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC14.17□□□□□ -0.14
CDC34P49427 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC14.17□□□□□ -0.14
CDC34P49427 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDC34P49427 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDC34P49427 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDC34P49427 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDC34P49427 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
CDC34P49427 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.16□□□□□ -0.14
CDC34P49427 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDC34P49427 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDC34P49427 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.16□□□□□ -0.14
CDC34P49427 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CDC34P49427 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14.16□□□□□ -0.14
CDC34P49427 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDC34P49427 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDC34P49427 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDC34P49427 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDC34P49427 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.16□□□□□ -0.14
CDC34P49427 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC14.16□□□□□ -0.14
CDC34P49427 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDC34P49427 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDC34P49427 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC14.16□□□□□ -0.14
CDC34P49427 SDHAP2-201ENST00000455183 2001 ntBASIC14.16□□□□□ -0.14
CDC34P49427 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDC34P49427 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDC34P49427 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC14.16□□□□□ -0.14
CDC34P49427 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDC34P49427 POM121L13P-201ENST00000422362 380 ntBASIC14.16□□□□□ -0.14
CDC34P49427 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC14.16□□□□□ -0.14
CDC34P49427 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDC34P49427 AL445675.2-201ENST00000620291 557 ntBASIC14.16□□□□□ -0.14
CDC34P49427 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
CDC34P49427 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDC34P49427 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC14.16□□□□□ -0.14
CDC34P49427 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDC34P49427 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDC34P49427 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC14.16□□□□□ -0.14
CDC34P49427 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDC34P49427 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDC34P49427 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDC34P49427 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDC34P49427 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDC34P49427 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CDC34P49427 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDC34P49427 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDC34P49427 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC14.15□□□□□ -0.14
CDC34P49427 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC14.15□□□□□ -0.14
CDC34P49427 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC14.15□□□□□ -0.14
CDC34P49427 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CDC34P49427 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CDC34P49427 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDC34P49427 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CDC34P49427 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDC34P49427 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDC34P49427 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDC34P49427 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms