Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NEDD4P46934 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NEDD4P46934 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
NEDD4P46934 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
NEDD4P46934 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NEDD4P46934 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
NEDD4P46934 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NEDD4P46934 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NEDD4P46934 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NEDD4P46934 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
NEDD4P46934 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NEDD4P46934 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC21.07■□□□□ 0.96
NEDD4P46934 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC21.07■□□□□ 0.96
NEDD4P46934 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NEDD4P46934 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NEDD4P46934 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NEDD4P46934 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC21.07■□□□□ 0.96
NEDD4P46934 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
NEDD4P46934 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NEDD4P46934 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC21.07■□□□□ 0.96
NEDD4P46934 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC21.06■□□□□ 0.96
NEDD4P46934 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
NEDD4P46934 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
NEDD4P46934 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NEDD4P46934 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NEDD4P46934 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
NEDD4P46934 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NEDD4P46934 MINOS1P3-201ENST00000457048 203 ntBASIC21.06■□□□□ 0.96
NEDD4P46934 FOSL1P1-201ENST00000511041 816 ntBASIC21.06■□□□□ 0.96
NEDD4P46934 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC21.06■□□□□ 0.96
NEDD4P46934 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC21.06■□□□□ 0.96
NEDD4P46934 PRR29-207ENST00000580752 458 ntTSL 3 BASIC21.06■□□□□ 0.96
NEDD4P46934 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
NEDD4P46934 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC21.06■□□□□ 0.96
NEDD4P46934 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NEDD4P46934 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
NEDD4P46934 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC21.06■□□□□ 0.96
NEDD4P46934 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NEDD4P46934 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NEDD4P46934 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC21.06■□□□□ 0.96
NEDD4P46934 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC21.06■□□□□ 0.96
NEDD4P46934 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NEDD4P46934 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC21.06■□□□□ 0.96
NEDD4P46934 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
NEDD4P46934 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NEDD4P46934 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
NEDD4P46934 AC096633.1-201ENST00000422446 749 ntBASIC21.05■□□□□ 0.96
NEDD4P46934 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC21.05■□□□□ 0.96
NEDD4P46934 AC007967.3-201ENST00000434308 558 ntBASIC21.05■□□□□ 0.96
NEDD4P46934 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC21.05■□□□□ 0.96
NEDD4P46934 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
NEDD4P46934 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC21.05■□□□□ 0.96
NEDD4P46934 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC21.05■□□□□ 0.96
NEDD4P46934 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC21.05■□□□□ 0.96
NEDD4P46934 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC21.05■□□□□ 0.96
NEDD4P46934 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC21.05■□□□□ 0.96
NEDD4P46934 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NEDD4P46934 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NEDD4P46934 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
NEDD4P46934 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
NEDD4P46934 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
NEDD4P46934 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC21.05■□□□□ 0.96
NEDD4P46934 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
NEDD4P46934 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NEDD4P46934 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
NEDD4P46934 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC21.05■□□□□ 0.96
NEDD4P46934 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NEDD4P46934 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC21.05■□□□□ 0.96
NEDD4P46934 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NEDD4P46934 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NEDD4P46934 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC21.05■□□□□ 0.96
NEDD4P46934 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC21.05■□□□□ 0.96
NEDD4P46934 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC21.05■□□□□ 0.96
NEDD4P46934 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NEDD4P46934 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NEDD4P46934 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
NEDD4P46934 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC21.04■□□□□ 0.96
NEDD4P46934 NUS1P2-201ENST00000417358 873 ntBASIC21.04■□□□□ 0.96
NEDD4P46934 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC21.04■□□□□ 0.96
NEDD4P46934 TOLLIP-AS1-201ENST00000530897 939 ntBASIC21.04■□□□□ 0.96
NEDD4P46934 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NEDD4P46934 PRELID1P1-202ENST00000567272 903 ntBASIC21.04■□□□□ 0.96
NEDD4P46934 AL732292.2-201ENST00000609649 430 ntBASIC21.04■□□□□ 0.96
NEDD4P46934 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NEDD4P46934 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NEDD4P46934 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NEDD4P46934 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC21.04■□□□□ 0.96
NEDD4P46934 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NEDD4P46934 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
NEDD4P46934 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
NEDD4P46934 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NEDD4P46934 AC006116.8-202ENST00000587620 1550 ntBASIC21.04■□□□□ 0.96
NEDD4P46934 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC21.04■□□□□ 0.96
NEDD4P46934 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NEDD4P46934 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NEDD4P46934 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NEDD4P46934 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
NEDD4P46934 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NEDD4P46934 CCS-201ENST00000310190 942 ntTSL 5 BASIC21.04■□□□□ 0.96
NEDD4P46934 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms