Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.54■□□□□ 0.72
USP8P40818 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.54■□□□□ 0.72
USP8P40818 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.54■□□□□ 0.72
USP8P40818 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
USP8P40818 COX11P1-201ENST00000489116 835 ntBASIC19.54■□□□□ 0.72
USP8P40818 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.54■□□□□ 0.72
USP8P40818 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
USP8P40818 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP8P40818 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.54■□□□□ 0.72
USP8P40818 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP8P40818 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
USP8P40818 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP8P40818 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
USP8P40818 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
USP8P40818 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.54■□□□□ 0.72
USP8P40818 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP8P40818 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.53■□□□□ 0.72
USP8P40818 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
USP8P40818 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
USP8P40818 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP8P40818 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP8P40818 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.53■□□□□ 0.72
USP8P40818 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP8P40818 AC005521.1-201ENST00000393351 872 ntBASIC19.53■□□□□ 0.72
USP8P40818 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.53■□□□□ 0.72
USP8P40818 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.53■□□□□ 0.72
USP8P40818 KRT18P57-201ENST00000443599 1254 ntBASIC19.53■□□□□ 0.72
USP8P40818 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
USP8P40818 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP8P40818 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP8P40818 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
USP8P40818 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP8P40818 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP8P40818 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.53■□□□□ 0.72
USP8P40818 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP8P40818 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
USP8P40818 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.53■□□□□ 0.72
USP8P40818 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.53■□□□□ 0.72
USP8P40818 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP8P40818 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
USP8P40818 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.53■□□□□ 0.72
USP8P40818 AC124067.4-201ENST00000519691 2379 ntBASIC19.52■□□□□ 0.72
USP8P40818 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
USP8P40818 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
USP8P40818 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.52■□□□□ 0.72
USP8P40818 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP8P40818 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.52■□□□□ 0.72
USP8P40818 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.52■□□□□ 0.72
USP8P40818 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP8P40818 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP8P40818 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
USP8P40818 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.52■□□□□ 0.72
USP8P40818 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
USP8P40818 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
USP8P40818 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
USP8P40818 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
USP8P40818 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP8P40818 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP8P40818 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.52■□□□□ 0.72
USP8P40818 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.52■□□□□ 0.72
USP8P40818 AL441883.1-201ENST00000566170 1045 ntBASIC19.52■□□□□ 0.72
USP8P40818 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
USP8P40818 AC139887.4-201ENST00000607877 719 ntBASIC19.52■□□□□ 0.72
USP8P40818 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
USP8P40818 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP8P40818 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.52■□□□□ 0.72
USP8P40818 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
USP8P40818 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC19.52■□□□□ 0.72
USP8P40818 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP8P40818 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
USP8P40818 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
USP8P40818 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
USP8P40818 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
USP8P40818 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
USP8P40818 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
USP8P40818 AC008764.6-201ENST00000595909 2069 ntBASIC19.52■□□□□ 0.71
USP8P40818 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
USP8P40818 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP8P40818 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP8P40818 AC011270.2-201ENST00000624293 2550 ntBASIC19.51■□□□□ 0.71
USP8P40818 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP8P40818 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP8P40818 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.51■□□□□ 0.71
USP8P40818 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USP8P40818 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP8P40818 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP8P40818 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP8P40818 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
USP8P40818 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.51■□□□□ 0.71
USP8P40818 AC034232.1-201ENST00000506026 1064 ntBASIC19.51■□□□□ 0.71
USP8P40818 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
USP8P40818 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.51■□□□□ 0.71
USP8P40818 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.51■□□□□ 0.71
USP8P40818 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USP8P40818 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.51■□□□□ 0.71
USP8P40818 LINC01023-201ENST00000606054 436 ntBASIC19.51■□□□□ 0.71
USP8P40818 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.51■□□□□ 0.71
USP8P40818 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP8P40818 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USP8P40818 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms