Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.44■□□□□ 0.38
EPHA3P29320 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
EPHA3P29320 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
EPHA3P29320 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.44■□□□□ 0.38
EPHA3P29320 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.44■□□□□ 0.38
EPHA3P29320 LINC00304-203ENST00000565008 1864 ntBASIC17.44■□□□□ 0.38
EPHA3P29320 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
EPHA3P29320 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
EPHA3P29320 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.44■□□□□ 0.38
EPHA3P29320 CD99P1-205ENST00000527459 561 ntBASIC17.44■□□□□ 0.38
EPHA3P29320 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
EPHA3P29320 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.44■□□□□ 0.38
EPHA3P29320 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.44■□□□□ 0.38
EPHA3P29320 AL023803.3-201ENST00000615559 522 ntBASIC17.44■□□□□ 0.38
EPHA3P29320 AC112497.1-201ENST00000624824 639 ntBASIC17.44■□□□□ 0.38
EPHA3P29320 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
EPHA3P29320 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.44■□□□□ 0.38
EPHA3P29320 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
EPHA3P29320 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
EPHA3P29320 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.44■□□□□ 0.38
EPHA3P29320 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
EPHA3P29320 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
EPHA3P29320 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
EPHA3P29320 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
EPHA3P29320 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.44■□□□□ 0.38
EPHA3P29320 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
EPHA3P29320 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
EPHA3P29320 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
EPHA3P29320 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
EPHA3P29320 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
EPHA3P29320 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EPHA3P29320 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EPHA3P29320 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.43■□□□□ 0.38
EPHA3P29320 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EPHA3P29320 AL139384.1-201ENST00000612143 3047 ntBASIC17.43■□□□□ 0.38
EPHA3P29320 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EPHA3P29320 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
EPHA3P29320 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EPHA3P29320 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EPHA3P29320 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EPHA3P29320 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.43■□□□□ 0.38
EPHA3P29320 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.43■□□□□ 0.38
EPHA3P29320 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EPHA3P29320 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
EPHA3P29320 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.43■□□□□ 0.38
EPHA3P29320 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EPHA3P29320 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.43■□□□□ 0.38
EPHA3P29320 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.43■□□□□ 0.38
EPHA3P29320 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.43■□□□□ 0.38
EPHA3P29320 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.43■□□□□ 0.38
EPHA3P29320 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.43■□□□□ 0.38
EPHA3P29320 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.43■□□□□ 0.38
EPHA3P29320 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
EPHA3P29320 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EPHA3P29320 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
EPHA3P29320 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EPHA3P29320 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
EPHA3P29320 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.43■□□□□ 0.38
EPHA3P29320 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EPHA3P29320 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EPHA3P29320 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EPHA3P29320 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
EPHA3P29320 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EPHA3P29320 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EPHA3P29320 AL121761.2-201ENST00000598007 1648 ntBASIC17.43■□□□□ 0.38
EPHA3P29320 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.43■□□□□ 0.38
EPHA3P29320 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EPHA3P29320 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
EPHA3P29320 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
EPHA3P29320 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
EPHA3P29320 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
EPHA3P29320 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.42■□□□□ 0.38
EPHA3P29320 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.42■□□□□ 0.38
EPHA3P29320 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
EPHA3P29320 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EPHA3P29320 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
EPHA3P29320 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.42■□□□□ 0.38
EPHA3P29320 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EPHA3P29320 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.42■□□□□ 0.38
EPHA3P29320 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
EPHA3P29320 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EPHA3P29320 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
EPHA3P29320 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.42■□□□□ 0.38
EPHA3P29320 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.42■□□□□ 0.38
EPHA3P29320 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.42■□□□□ 0.38
EPHA3P29320 MIR3180-4-201ENST00000582223 153 ntBASIC17.42■□□□□ 0.38
EPHA3P29320 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.42■□□□□ 0.38
EPHA3P29320 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.42■□□□□ 0.38
EPHA3P29320 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EPHA3P29320 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EPHA3P29320 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.42■□□□□ 0.38
EPHA3P29320 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EPHA3P29320 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EPHA3P29320 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.42■□□□□ 0.38
EPHA3P29320 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EPHA3P29320 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
EPHA3P29320 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EPHA3P29320 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.41■□□□□ 0.38
EPHA3P29320 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EPHA3P29320 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms