Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
RXRBP28702 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC23.26■■□□□ 1.31
RXRBP28702 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
RXRBP28702 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC23.26■■□□□ 1.31
RXRBP28702 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
RXRBP28702 MIR4525-201ENST00000580000 75 ntBASIC23.26■■□□□ 1.31
RXRBP28702 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC23.26■■□□□ 1.31
RXRBP28702 AC068587.10-201ENST00000641210 219 ntBASIC23.26■■□□□ 1.31
RXRBP28702 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
RXRBP28702 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC23.26■■□□□ 1.31
RXRBP28702 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RXRBP28702 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC23.26■■□□□ 1.31
RXRBP28702 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RXRBP28702 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RXRBP28702 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC23.26■■□□□ 1.31
RXRBP28702 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC23.26■■□□□ 1.31
RXRBP28702 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
RXRBP28702 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC23.25■■□□□ 1.31
RXRBP28702 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RXRBP28702 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
RXRBP28702 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RXRBP28702 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
RXRBP28702 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC23.25■■□□□ 1.31
RXRBP28702 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RXRBP28702 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RXRBP28702 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
RXRBP28702 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC23.25■■□□□ 1.31
RXRBP28702 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC23.25■■□□□ 1.31
RXRBP28702 KLF4P1-201ENST00000412782 1185 ntBASIC23.25■■□□□ 1.31
RXRBP28702 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC23.25■■□□□ 1.31
RXRBP28702 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RXRBP28702 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RXRBP28702 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC23.25■■□□□ 1.31
RXRBP28702 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RXRBP28702 AL162274.1-201ENST00000617191 1098 ntBASIC23.25■■□□□ 1.31
RXRBP28702 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RXRBP28702 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
RXRBP28702 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC23.25■■□□□ 1.31
RXRBP28702 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RXRBP28702 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC23.24■■□□□ 1.31
RXRBP28702 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RXRBP28702 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RXRBP28702 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RXRBP28702 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
RXRBP28702 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
RXRBP28702 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
RXRBP28702 MIR658-201ENST00000385210 100 ntBASIC23.24■■□□□ 1.31
RXRBP28702 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RXRBP28702 SPDYE14P-201ENST00000442619 822 ntBASIC23.24■■□□□ 1.31
RXRBP28702 TP53TG3HP-202ENST00000569755 579 ntBASIC23.24■■□□□ 1.31
RXRBP28702 SSH2-210ENST00000582084 560 ntTSL 3 BASIC23.24■■□□□ 1.31
RXRBP28702 USP39-204ENST00000409766 2033 ntTSL 2 BASIC23.24■■□□□ 1.31
RXRBP28702 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
RXRBP28702 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RXRBP28702 SIRPAP1-201ENST00000448467 1770 ntBASIC23.24■■□□□ 1.31
RXRBP28702 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC23.24■■□□□ 1.31
RXRBP28702 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
RXRBP28702 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
RXRBP28702 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
RXRBP28702 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
RXRBP28702 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RXRBP28702 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
RXRBP28702 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC23.23■■□□□ 1.31
RXRBP28702 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RXRBP28702 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC23.23■■□□□ 1.31
RXRBP28702 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC23.23■■□□□ 1.31
RXRBP28702 PI4KAP1-204ENST00000612579 1703 ntBASIC23.23■■□□□ 1.31
RXRBP28702 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
RXRBP28702 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC23.23■■□□□ 1.31
RXRBP28702 NME6-203ENST00000415644 849 ntTSL 2 BASIC23.23■■□□□ 1.31
RXRBP28702 SPTLC1P1-201ENST00000447199 261 ntBASIC23.23■■□□□ 1.31
RXRBP28702 PPP6R2P1-201ENST00000450880 1275 ntBASIC23.23■■□□□ 1.31
RXRBP28702 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RXRBP28702 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RXRBP28702 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC23.23■■□□□ 1.31
RXRBP28702 FAM8A2P-201ENST00000528813 1142 ntBASIC23.23■■□□□ 1.31
RXRBP28702 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RXRBP28702 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC23.23■■□□□ 1.31
RXRBP28702 ARL16-202ENST00000570561 768 ntTSL 2 BASIC23.23■■□□□ 1.31
RXRBP28702 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC23.23■■□□□ 1.31
RXRBP28702 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC23.23■■□□□ 1.31
RXRBP28702 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC23.23■■□□□ 1.31
RXRBP28702 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RXRBP28702 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC23.23■■□□□ 1.31
RXRBP28702 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC23.23■■□□□ 1.31
RXRBP28702 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC23.23■■□□□ 1.31
RXRBP28702 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RXRBP28702 AC138969.3-201ENST00000546612 1459 ntBASIC23.23■■□□□ 1.31
RXRBP28702 AC138932.2-201ENST00000548268 1459 ntBASIC23.23■■□□□ 1.31
RXRBP28702 AC126755.4-201ENST00000549796 1459 ntBASIC23.23■■□□□ 1.31
RXRBP28702 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC23.23■■□□□ 1.31
RXRBP28702 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RXRBP28702 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RXRBP28702 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RXRBP28702 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
RXRBP28702 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RXRBP28702 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
RXRBP28702 AC099778.1-201ENST00000568593 1911 ntBASIC23.22■■□□□ 1.31
RXRBP28702 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC23.22■■□□□ 1.31
RXRBP28702 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms