Protein–RNA interactions for Protein: P23634

ATP2B4, Plasma membrane calcium-transporting ATPase 4, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4P23634 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC21.6■■□□□ 1.05
ATP2B4P23634 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC21.6■■□□□ 1.05
ATP2B4P23634 TCAP-202ENST00000578283 583 ntTSL 5 BASIC21.6■■□□□ 1.05
ATP2B4P23634 AP001160.2-201ENST00000596071 487 ntBASIC21.6■■□□□ 1.05
ATP2B4P23634 MTDHP5-201ENST00000598980 586 ntBASIC21.6■■□□□ 1.05
ATP2B4P23634 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
ATP2B4P23634 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATP2B4P23634 AC006504.4-201ENST00000592118 1568 ntBASIC21.6■■□□□ 1.05
ATP2B4P23634 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATP2B4P23634 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATP2B4P23634 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
ATP2B4P23634 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC21.6■■□□□ 1.05
ATP2B4P23634 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
ATP2B4P23634 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ATP2B4P23634 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ATP2B4P23634 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATP2B4P23634 AC148477.5-201ENST00000625164 1645 ntBASIC21.59■■□□□ 1.05
ATP2B4P23634 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ATP2B4P23634 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ATP2B4P23634 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ATP2B4P23634 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATP2B4P23634 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATP2B4P23634 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATP2B4P23634 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
ATP2B4P23634 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC21.59■■□□□ 1.05
ATP2B4P23634 AC003669.1-201ENST00000334569 611 ntBASIC21.59■■□□□ 1.05
ATP2B4P23634 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ATP2B4P23634 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATP2B4P23634 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATP2B4P23634 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATP2B4P23634 METTL26-205ENST00000397666 726 ntTSL 2 BASIC21.59■■□□□ 1.05
ATP2B4P23634 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATP2B4P23634 KLF4P1-201ENST00000412782 1185 ntBASIC21.59■■□□□ 1.05
ATP2B4P23634 ELK2BP-201ENST00000415014 1224 ntBASIC21.59■■□□□ 1.05
ATP2B4P23634 KRT18P2-201ENST00000447938 1258 ntBASIC21.59■■□□□ 1.05
ATP2B4P23634 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATP2B4P23634 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC21.59■■□□□ 1.05
ATP2B4P23634 TMED1-207ENST00000591695 809 ntTSL 5 BASIC21.59■■□□□ 1.05
ATP2B4P23634 AC019129.2-201ENST00000609837 1235 ntBASIC21.59■■□□□ 1.05
ATP2B4P23634 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC21.59■■□□□ 1.05
ATP2B4P23634 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC21.59■■□□□ 1.05
ATP2B4P23634 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC21.59■■□□□ 1.05
ATP2B4P23634 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATP2B4P23634 FUT8-AS1-201ENST00000621019 1521 ntBASIC21.59■■□□□ 1.05
ATP2B4P23634 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATP2B4P23634 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ATP2B4P23634 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATP2B4P23634 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
ATP2B4P23634 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ATP2B4P23634 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ATP2B4P23634 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ATP2B4P23634 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ATP2B4P23634 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC21.58■■□□□ 1.05
ATP2B4P23634 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ATP2B4P23634 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ATP2B4P23634 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
ATP2B4P23634 NCF1C-201ENST00000438382 1427 ntBASIC21.58■■□□□ 1.05
ATP2B4P23634 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.58■■□□□ 1.05
ATP2B4P23634 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
ATP2B4P23634 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC21.58■■□□□ 1.05
ATP2B4P23634 COA5-202ENST00000409997 557 ntTSL 4 BASIC21.58■■□□□ 1.05
ATP2B4P23634 SIGLEC30P-201ENST00000455569 941 ntBASIC21.58■■□□□ 1.05
ATP2B4P23634 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC21.58■■□□□ 1.05
ATP2B4P23634 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC21.58■■□□□ 1.05
ATP2B4P23634 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC21.58■■□□□ 1.05
ATP2B4P23634 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC21.58■■□□□ 1.05
ATP2B4P23634 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC21.58■■□□□ 1.05
ATP2B4P23634 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ATP2B4P23634 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
ATP2B4P23634 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC21.58■■□□□ 1.05
ATP2B4P23634 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC21.58■■□□□ 1.05
ATP2B4P23634 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
ATP2B4P23634 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
ATP2B4P23634 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATP2B4P23634 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATP2B4P23634 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.57■■□□□ 1.04
ATP2B4P23634 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC21.57■■□□□ 1.04
ATP2B4P23634 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
ATP2B4P23634 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATP2B4P23634 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATP2B4P23634 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATP2B4P23634 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC21.57■■□□□ 1.04
ATP2B4P23634 HNRNPA1P28-201ENST00000424481 961 ntBASIC21.57■■□□□ 1.04
ATP2B4P23634 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC21.57■■□□□ 1.04
ATP2B4P23634 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
ATP2B4P23634 AC004967.1-201ENST00000453589 447 ntBASIC21.57■■□□□ 1.04
ATP2B4P23634 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC21.57■■□□□ 1.04
ATP2B4P23634 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC21.57■■□□□ 1.04
ATP2B4P23634 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC21.57■■□□□ 1.04
ATP2B4P23634 AC116407.2-201ENST00000613639 860 ntBASIC21.57■■□□□ 1.04
ATP2B4P23634 AC079781.4-201ENST00000641908 219 ntBASIC21.57■■□□□ 1.04
ATP2B4P23634 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATP2B4P23634 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATP2B4P23634 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
ATP2B4P23634 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ATP2B4P23634 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
ATP2B4P23634 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATP2B4P23634 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ATP2B4P23634 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATP2B4P23634 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms