Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NR4A1P22736 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NR4A1P22736 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NR4A1P22736 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.68■□□□□ 0.26
NR4A1P22736 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NR4A1P22736 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
NR4A1P22736 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.68■□□□□ 0.26
NR4A1P22736 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.68■□□□□ 0.26
NR4A1P22736 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.68■□□□□ 0.26
NR4A1P22736 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NR4A1P22736 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.68■□□□□ 0.26
NR4A1P22736 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
NR4A1P22736 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.68■□□□□ 0.26
NR4A1P22736 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
NR4A1P22736 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
NR4A1P22736 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NR4A1P22736 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NR4A1P22736 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.68■□□□□ 0.26
NR4A1P22736 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.68■□□□□ 0.26
NR4A1P22736 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NR4A1P22736 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NR4A1P22736 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NR4A1P22736 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.68■□□□□ 0.26
NR4A1P22736 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NR4A1P22736 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NR4A1P22736 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.68■□□□□ 0.26
NR4A1P22736 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NR4A1P22736 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NR4A1P22736 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NR4A1P22736 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NR4A1P22736 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NR4A1P22736 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
NR4A1P22736 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NR4A1P22736 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
NR4A1P22736 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NR4A1P22736 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NR4A1P22736 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.67■□□□□ 0.26
NR4A1P22736 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NR4A1P22736 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
NR4A1P22736 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.67■□□□□ 0.26
NR4A1P22736 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
NR4A1P22736 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NR4A1P22736 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
NR4A1P22736 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NR4A1P22736 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
NR4A1P22736 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.67■□□□□ 0.26
NR4A1P22736 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NR4A1P22736 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.67■□□□□ 0.26
NR4A1P22736 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.67■□□□□ 0.26
NR4A1P22736 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.67■□□□□ 0.26
NR4A1P22736 MIR6786-201ENST00000616843 113 ntBASIC16.67■□□□□ 0.26
NR4A1P22736 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
NR4A1P22736 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NR4A1P22736 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NR4A1P22736 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NR4A1P22736 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NR4A1P22736 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.67■□□□□ 0.26
NR4A1P22736 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
NR4A1P22736 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NR4A1P22736 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NR4A1P22736 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NR4A1P22736 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.67■□□□□ 0.26
NR4A1P22736 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.66■□□□□ 0.26
NR4A1P22736 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NR4A1P22736 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NR4A1P22736 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NR4A1P22736 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NR4A1P22736 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.66■□□□□ 0.26
NR4A1P22736 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NR4A1P22736 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.66■□□□□ 0.26
NR4A1P22736 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NR4A1P22736 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NR4A1P22736 MTMR9LP-203ENST00000426597 1545 ntBASIC16.66■□□□□ 0.26
NR4A1P22736 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.66■□□□□ 0.26
NR4A1P22736 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NR4A1P22736 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
NR4A1P22736 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
NR4A1P22736 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NR4A1P22736 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
NR4A1P22736 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.66■□□□□ 0.26
NR4A1P22736 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
NR4A1P22736 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.66■□□□□ 0.26
NR4A1P22736 B3GAT3P1-201ENST00000471720 806 ntBASIC16.66■□□□□ 0.26
NR4A1P22736 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
NR4A1P22736 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
NR4A1P22736 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NR4A1P22736 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.66■□□□□ 0.26
NR4A1P22736 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.66■□□□□ 0.26
NR4A1P22736 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.66■□□□□ 0.26
NR4A1P22736 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.66■□□□□ 0.26
NR4A1P22736 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NR4A1P22736 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.66■□□□□ 0.26
NR4A1P22736 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NR4A1P22736 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NR4A1P22736 PCDHB19P-201ENST00000570871 2371 ntBASIC16.66■□□□□ 0.26
NR4A1P22736 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NR4A1P22736 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NR4A1P22736 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.66■□□□□ 0.26
NR4A1P22736 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.66■□□□□ 0.26
NR4A1P22736 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms