Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
CFTRP13569 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
CFTRP13569 DDT-204ENST00000404092 805 ntTSL 3 BASIC30.43■■■□□ 2.46
CFTRP13569 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
CFTRP13569 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
CFTRP13569 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC30.43■■■□□ 2.46
CFTRP13569 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
CFTRP13569 CXCL1P1-201ENST00000502804 216 ntBASIC30.43■■■□□ 2.46
CFTRP13569 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
CFTRP13569 DUT-210ENST00000559935 569 ntTSL 3 BASIC30.43■■■□□ 2.46
CFTRP13569 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC30.43■■■□□ 2.46
CFTRP13569 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
CFTRP13569 REM2-202ENST00000536884 1331 ntTSL 2 BASIC30.43■■■□□ 2.46
CFTRP13569 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
CFTRP13569 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC30.43■■■□□ 2.46
CFTRP13569 AC009336.1-201ENST00000608941 1553 ntBASIC30.43■■■□□ 2.46
CFTRP13569 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
CFTRP13569 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC30.42■■■□□ 2.46
CFTRP13569 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC30.42■■■□□ 2.46
CFTRP13569 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
CFTRP13569 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
CFTRP13569 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
CFTRP13569 MIR661-201ENST00000384842 89 ntBASIC30.42■■■□□ 2.46
CFTRP13569 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC30.42■■■□□ 2.46
CFTRP13569 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC30.42■■■□□ 2.46
CFTRP13569 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC30.42■■■□□ 2.46
CFTRP13569 FAM86GP-201ENST00000448322 971 ntBASIC30.42■■■□□ 2.46
CFTRP13569 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC30.42■■■□□ 2.46
CFTRP13569 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC30.42■■■□□ 2.46
CFTRP13569 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC30.42■■■□□ 2.46
CFTRP13569 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
CFTRP13569 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
CFTRP13569 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
CFTRP13569 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC30.42■■■□□ 2.46
CFTRP13569 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC30.42■■■□□ 2.46
CFTRP13569 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC30.42■■■□□ 2.46
CFTRP13569 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
CFTRP13569 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
CFTRP13569 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC30.41■■■□□ 2.46
CFTRP13569 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC30.41■■■□□ 2.46
CFTRP13569 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
CFTRP13569 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC30.41■■■□□ 2.46
CFTRP13569 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC30.41■■■□□ 2.46
CFTRP13569 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC30.41■■■□□ 2.46
CFTRP13569 AC190387.1-201ENST00000551683 408 ntBASIC30.41■■■□□ 2.46
CFTRP13569 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC30.41■■■□□ 2.46
CFTRP13569 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
CFTRP13569 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
CFTRP13569 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC30.4■■■□□ 2.46
CFTRP13569 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC30.4■■■□□ 2.46
CFTRP13569 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CFTRP13569 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
CFTRP13569 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC30.4■■■□□ 2.46
CFTRP13569 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC30.4■■■□□ 2.46
CFTRP13569 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CFTRP13569 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CFTRP13569 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC30.4■■■□□ 2.46
CFTRP13569 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
CFTRP13569 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
CFTRP13569 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
CFTRP13569 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CFTRP13569 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC30.4■■■□□ 2.46
CFTRP13569 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC30.4■■■□□ 2.46
CFTRP13569 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
CFTRP13569 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
CFTRP13569 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
CFTRP13569 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC30.39■■■□□ 2.46
CFTRP13569 HLA-DRB6-201ENST00000411500 1235 ntBASIC30.39■■■□□ 2.46
CFTRP13569 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC30.39■■■□□ 2.46
CFTRP13569 AC051619.7-201ENST00000568314 623 ntBASIC30.39■■■□□ 2.46
CFTRP13569 AC099522.2-201ENST00000607001 744 ntBASIC30.39■■■□□ 2.46
CFTRP13569 ACTL9-202ENST00000612068 1252 ntBASIC30.39■■■□□ 2.46
CFTRP13569 AL035252.4-201ENST00000624174 288 ntBASIC30.39■■■□□ 2.46
CFTRP13569 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC30.39■■■□□ 2.46
CFTRP13569 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC30.39■■■□□ 2.46
CFTRP13569 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CFTRP13569 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
CFTRP13569 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
CFTRP13569 PHGDH-209ENST00000641074 1780 ntBASIC30.39■■■□□ 2.46
CFTRP13569 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC30.39■■■□□ 2.45
CFTRP13569 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC30.39■■■□□ 2.45
CFTRP13569 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CFTRP13569 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CFTRP13569 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC30.38■■■□□ 2.45
CFTRP13569 PMS2P4-201ENST00000412466 1052 ntBASIC30.38■■■□□ 2.45
CFTRP13569 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CFTRP13569 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
CFTRP13569 CYB561-216ENST00000582297 897 ntTSL 3 BASIC30.38■■■□□ 2.45
CFTRP13569 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CFTRP13569 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC30.38■■■□□ 2.45
CFTRP13569 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC30.38■■■□□ 2.45
CFTRP13569 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC30.38■■■□□ 2.45
CFTRP13569 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC30.38■■■□□ 2.45
CFTRP13569 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
CFTRP13569 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CFTRP13569 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CFTRP13569 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
CFTRP13569 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC30.38■■■□□ 2.45
CFTRP13569 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
CFTRP13569 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms