Protein–RNA interactions for Protein: P12694

BCKDHA, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHAP12694 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.13■□□□□ 0.33
BCKDHAP12694 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BCKDHAP12694 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
BCKDHAP12694 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.13■□□□□ 0.33
BCKDHAP12694 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BCKDHAP12694 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
BCKDHAP12694 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BCKDHAP12694 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BCKDHAP12694 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
BCKDHAP12694 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
BCKDHAP12694 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.13■□□□□ 0.33
BCKDHAP12694 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.13■□□□□ 0.33
BCKDHAP12694 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BCKDHAP12694 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.13■□□□□ 0.33
BCKDHAP12694 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.13■□□□□ 0.33
BCKDHAP12694 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.12■□□□□ 0.33
BCKDHAP12694 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.12■□□□□ 0.33
BCKDHAP12694 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
BCKDHAP12694 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.12■□□□□ 0.33
BCKDHAP12694 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.12■□□□□ 0.33
BCKDHAP12694 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BCKDHAP12694 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
BCKDHAP12694 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BCKDHAP12694 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BCKDHAP12694 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BCKDHAP12694 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.12■□□□□ 0.33
BCKDHAP12694 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.12■□□□□ 0.33
BCKDHAP12694 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BCKDHAP12694 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.12■□□□□ 0.33
BCKDHAP12694 AC034232.1-201ENST00000506026 1064 ntBASIC17.12■□□□□ 0.33
BCKDHAP12694 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.12■□□□□ 0.33
BCKDHAP12694 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.12■□□□□ 0.33
BCKDHAP12694 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
BCKDHAP12694 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BCKDHAP12694 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BCKDHAP12694 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.12■□□□□ 0.33
BCKDHAP12694 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BCKDHAP12694 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BCKDHAP12694 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
BCKDHAP12694 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
BCKDHAP12694 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BCKDHAP12694 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
BCKDHAP12694 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BCKDHAP12694 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
BCKDHAP12694 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
BCKDHAP12694 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BCKDHAP12694 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.11■□□□□ 0.33
BCKDHAP12694 AL138688.1-201ENST00000624851 1594 ntBASIC17.11■□□□□ 0.33
BCKDHAP12694 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BCKDHAP12694 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BCKDHAP12694 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BCKDHAP12694 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.11■□□□□ 0.33
BCKDHAP12694 AC012313.1-201ENST00000593393 3059 ntBASIC17.11■□□□□ 0.33
BCKDHAP12694 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.11■□□□□ 0.33
BCKDHAP12694 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.11■□□□□ 0.33
BCKDHAP12694 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BCKDHAP12694 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
BCKDHAP12694 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
BCKDHAP12694 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.11■□□□□ 0.33
BCKDHAP12694 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
BCKDHAP12694 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.11■□□□□ 0.33
BCKDHAP12694 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.11■□□□□ 0.33
BCKDHAP12694 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.11■□□□□ 0.33
BCKDHAP12694 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
BCKDHAP12694 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
BCKDHAP12694 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.11■□□□□ 0.33
BCKDHAP12694 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
BCKDHAP12694 AC093827.2-201ENST00000512654 315 ntBASIC17.11■□□□□ 0.33
BCKDHAP12694 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.11■□□□□ 0.33
BCKDHAP12694 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.11■□□□□ 0.33
BCKDHAP12694 AC024563.2-201ENST00000603282 481 ntBASIC17.11■□□□□ 0.33
BCKDHAP12694 AC145285.6-201ENST00000604632 637 ntBASIC17.11■□□□□ 0.33
BCKDHAP12694 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
BCKDHAP12694 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
BCKDHAP12694 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
BCKDHAP12694 AC009949.1-201ENST00000623048 1830 ntBASIC17.11■□□□□ 0.33
BCKDHAP12694 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.11■□□□□ 0.33
BCKDHAP12694 LINC00304-203ENST00000565008 1864 ntBASIC17.11■□□□□ 0.33
BCKDHAP12694 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BCKDHAP12694 AC080080.1-201ENST00000625121 2420 ntBASIC17.11■□□□□ 0.33
BCKDHAP12694 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BCKDHAP12694 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BCKDHAP12694 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BCKDHAP12694 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.11■□□□□ 0.33
BCKDHAP12694 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
BCKDHAP12694 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
BCKDHAP12694 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.11■□□□□ 0.33
BCKDHAP12694 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BCKDHAP12694 OR6D1P-202ENST00000641007 5290 ntBASIC17.11■□□□□ 0.33
BCKDHAP12694 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.11■□□□□ 0.33
BCKDHAP12694 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
BCKDHAP12694 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.11■□□□□ 0.33
BCKDHAP12694 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BCKDHAP12694 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.1■□□□□ 0.33
BCKDHAP12694 AL023806.1-201ENST00000603994 1649 ntBASIC17.1■□□□□ 0.33
BCKDHAP12694 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BCKDHAP12694 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.1■□□□□ 0.33
BCKDHAP12694 AC106820.2-201ENST00000563775 3264 ntBASIC17.1■□□□□ 0.33
BCKDHAP12694 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BCKDHAP12694 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms