Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.02■□□□□ 0.47
MMP2P08253 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
MMP2P08253 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.02■□□□□ 0.47
MMP2P08253 AC233702.3-201ENST00000578656 1387 ntBASIC18.02■□□□□ 0.47
MMP2P08253 PCDHB18P-201ENST00000524813 2368 ntBASIC18.02■□□□□ 0.47
MMP2P08253 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
MMP2P08253 REXO1L11P-201ENST00000620964 1927 ntBASIC18.02■□□□□ 0.47
MMP2P08253 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
MMP2P08253 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
MMP2P08253 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
MMP2P08253 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
MMP2P08253 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.01■□□□□ 0.47
MMP2P08253 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MMP2P08253 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.01■□□□□ 0.47
MMP2P08253 AC010460.3-201ENST00000511359 1579 ntBASIC18.01■□□□□ 0.47
MMP2P08253 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
MMP2P08253 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MMP2P08253 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.01■□□□□ 0.47
MMP2P08253 AC125634.1-201ENST00000438758 1403 ntBASIC18.01■□□□□ 0.47
MMP2P08253 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MMP2P08253 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
MMP2P08253 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MMP2P08253 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MMP2P08253 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
MMP2P08253 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.01■□□□□ 0.47
MMP2P08253 AC246785.2-201ENST00000432512 513 ntBASIC18.01■□□□□ 0.47
MMP2P08253 ATP5G2P1-201ENST00000433580 426 ntBASIC18.01■□□□□ 0.47
MMP2P08253 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.01■□□□□ 0.47
MMP2P08253 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.01■□□□□ 0.47
MMP2P08253 AC011840.4-201ENST00000578471 627 ntBASIC18.01■□□□□ 0.47
MMP2P08253 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.01■□□□□ 0.47
MMP2P08253 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.01■□□□□ 0.47
MMP2P08253 AL138831.2-201ENST00000606564 490 ntBASIC18.01■□□□□ 0.47
MMP2P08253 AC116407.2-201ENST00000613639 860 ntBASIC18.01■□□□□ 0.47
MMP2P08253 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
MMP2P08253 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
MMP2P08253 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MMP2P08253 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MMP2P08253 AC020763.4-201ENST00000623414 4170 ntBASIC18.01■□□□□ 0.47
MMP2P08253 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.01■□□□□ 0.47
MMP2P08253 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
MMP2P08253 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
MMP2P08253 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.01■□□□□ 0.47
MMP2P08253 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MMP2P08253 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
MMP2P08253 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.01■□□□□ 0.47
MMP2P08253 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MMP2P08253 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MMP2P08253 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18■□□□□ 0.47
MMP2P08253 AC097374.2-201ENST00000618617 1306 ntBASIC18■□□□□ 0.47
MMP2P08253 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
MMP2P08253 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MMP2P08253 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
MMP2P08253 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
MMP2P08253 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18■□□□□ 0.47
MMP2P08253 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
MMP2P08253 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18■□□□□ 0.47
MMP2P08253 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MMP2P08253 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
MMP2P08253 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18■□□□□ 0.47
MMP2P08253 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
MMP2P08253 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18■□□□□ 0.47
MMP2P08253 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18■□□□□ 0.47
MMP2P08253 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
MMP2P08253 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
MMP2P08253 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18■□□□□ 0.47
MMP2P08253 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MMP2P08253 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MMP2P08253 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18■□□□□ 0.47
MMP2P08253 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18■□□□□ 0.47
MMP2P08253 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
MMP2P08253 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
MMP2P08253 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
MMP2P08253 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
MMP2P08253 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
MMP2P08253 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
MMP2P08253 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18■□□□□ 0.47
MMP2P08253 AL355312.1-201ENST00000407115 2176 ntBASIC18■□□□□ 0.47
MMP2P08253 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18■□□□□ 0.47
MMP2P08253 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18■□□□□ 0.47
MMP2P08253 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18■□□□□ 0.47
MMP2P08253 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
MMP2P08253 LINC00896-202ENST00000609602 2128 ntBASIC17.99■□□□□ 0.47
MMP2P08253 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MMP2P08253 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
MMP2P08253 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
MMP2P08253 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MMP2P08253 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
MMP2P08253 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MMP2P08253 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
MMP2P08253 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MMP2P08253 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
MMP2P08253 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MMP2P08253 UPK3BP1-201ENST00000428678 509 ntBASIC17.99■□□□□ 0.47
MMP2P08253 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
MMP2P08253 TOB2P1-201ENST00000469761 992 ntBASIC17.99■□□□□ 0.47
MMP2P08253 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
MMP2P08253 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
MMP2P08253 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.99■□□□□ 0.47
MMP2P08253 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms