Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGN1P05114 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMGN1P05114 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
HMGN1P05114 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMGN1P05114 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
HMGN1P05114 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HMGN1P05114 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HMGN1P05114 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HMGN1P05114 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HMGN1P05114 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HMGN1P05114 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMGN1P05114 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HMGN1P05114 AD000864.1-201ENST00000624076 2295 ntBASIC16.24■□□□□ 0.19
HMGN1P05114 PCDHA12-202ENST00000613593 2588 ntBASIC16.24■□□□□ 0.19
HMGN1P05114 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMGN1P05114 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMGN1P05114 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HMGN1P05114 LINC00602-201ENST00000629776 2065 ntBASIC16.24■□□□□ 0.19
HMGN1P05114 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMGN1P05114 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.24■□□□□ 0.19
HMGN1P05114 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.24■□□□□ 0.19
HMGN1P05114 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMGN1P05114 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMGN1P05114 AC012618.2-201ENST00000428058 849 ntBASIC16.24■□□□□ 0.19
HMGN1P05114 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMGN1P05114 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.24■□□□□ 0.19
HMGN1P05114 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.24■□□□□ 0.19
HMGN1P05114 AC010240.3-201ENST00000607688 395 ntBASIC16.24■□□□□ 0.19
HMGN1P05114 AC116407.2-201ENST00000613639 860 ntBASIC16.24■□□□□ 0.19
HMGN1P05114 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.24■□□□□ 0.19
HMGN1P05114 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HMGN1P05114 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMGN1P05114 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
HMGN1P05114 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.24■□□□□ 0.19
HMGN1P05114 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMGN1P05114 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMGN1P05114 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMGN1P05114 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.24■□□□□ 0.19
HMGN1P05114 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMGN1P05114 AC080080.1-201ENST00000625121 2420 ntBASIC16.24■□□□□ 0.19
HMGN1P05114 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HMGN1P05114 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
HMGN1P05114 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
HMGN1P05114 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMGN1P05114 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMGN1P05114 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HMGN1P05114 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMGN1P05114 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMGN1P05114 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HMGN1P05114 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
HMGN1P05114 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.23■□□□□ 0.19
HMGN1P05114 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMGN1P05114 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HMGN1P05114 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.23■□□□□ 0.19
HMGN1P05114 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMGN1P05114 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMGN1P05114 KRT18P29-201ENST00000397031 1267 ntBASIC16.23■□□□□ 0.19
HMGN1P05114 UBE2SP1-201ENST00000450587 669 ntBASIC16.23■□□□□ 0.19
HMGN1P05114 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HMGN1P05114 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.23■□□□□ 0.19
HMGN1P05114 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.23■□□□□ 0.19
HMGN1P05114 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.23■□□□□ 0.19
HMGN1P05114 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.23■□□□□ 0.19
HMGN1P05114 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.23■□□□□ 0.19
HMGN1P05114 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC16.23■□□□□ 0.19
HMGN1P05114 ITM2C-210ENST00000620962 501 ntBASIC16.23■□□□□ 0.19
HMGN1P05114 AC113410.3-201ENST00000623366 203 ntBASIC16.23■□□□□ 0.19
HMGN1P05114 AL049637.2-201ENST00000641778 930 ntBASIC16.23■□□□□ 0.19
HMGN1P05114 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
HMGN1P05114 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.23■□□□□ 0.19
HMGN1P05114 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
HMGN1P05114 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HMGN1P05114 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HMGN1P05114 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.23■□□□□ 0.19
HMGN1P05114 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.23■□□□□ 0.19
HMGN1P05114 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
HMGN1P05114 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMGN1P05114 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
HMGN1P05114 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMGN1P05114 AP001094.4-201ENST00000579008 2176 ntBASIC16.23■□□□□ 0.19
HMGN1P05114 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.23■□□□□ 0.19
HMGN1P05114 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.23■□□□□ 0.19
HMGN1P05114 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
HMGN1P05114 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMGN1P05114 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMGN1P05114 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
HMGN1P05114 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMGN1P05114 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMGN1P05114 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMGN1P05114 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
HMGN1P05114 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.22■□□□□ 0.19
HMGN1P05114 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMGN1P05114 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HMGN1P05114 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.22■□□□□ 0.19
HMGN1P05114 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
HMGN1P05114 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
HMGN1P05114 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.22■□□□□ 0.19
HMGN1P05114 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMGN1P05114 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMGN1P05114 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms