Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
LDLRP01130 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LDLRP01130 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LDLRP01130 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LDLRP01130 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.34■□□□□ 0.37
LDLRP01130 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
LDLRP01130 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LDLRP01130 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.34■□□□□ 0.37
LDLRP01130 AC004951.3-201ENST00000418645 1148 ntBASIC17.34■□□□□ 0.37
LDLRP01130 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LDLRP01130 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.34■□□□□ 0.37
LDLRP01130 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.34■□□□□ 0.37
LDLRP01130 AC008040.2-201ENST00000461049 708 ntBASIC17.34■□□□□ 0.37
LDLRP01130 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LDLRP01130 KRT8P32-201ENST00000512863 1461 ntBASIC17.34■□□□□ 0.37
LDLRP01130 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.34■□□□□ 0.37
LDLRP01130 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.34■□□□□ 0.37
LDLRP01130 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
LDLRP01130 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.34■□□□□ 0.37
LDLRP01130 AL512604.3-201ENST00000569583 964 ntBASIC17.34■□□□□ 0.37
LDLRP01130 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.34■□□□□ 0.37
LDLRP01130 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LDLRP01130 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.34■□□□□ 0.37
LDLRP01130 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
LDLRP01130 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LDLRP01130 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.34■□□□□ 0.37
LDLRP01130 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LDLRP01130 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LDLRP01130 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LDLRP01130 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LDLRP01130 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LDLRP01130 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.33■□□□□ 0.37
LDLRP01130 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
LDLRP01130 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
LDLRP01130 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LDLRP01130 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.33■□□□□ 0.37
LDLRP01130 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LDLRP01130 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LDLRP01130 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LDLRP01130 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LDLRP01130 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.33■□□□□ 0.36
LDLRP01130 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LDLRP01130 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
LDLRP01130 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
LDLRP01130 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LDLRP01130 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.33■□□□□ 0.36
LDLRP01130 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.33■□□□□ 0.36
LDLRP01130 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.33■□□□□ 0.36
LDLRP01130 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.33■□□□□ 0.36
LDLRP01130 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.33■□□□□ 0.36
LDLRP01130 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LDLRP01130 AC080080.1-201ENST00000625121 2420 ntBASIC17.33■□□□□ 0.36
LDLRP01130 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
LDLRP01130 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LDLRP01130 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
LDLRP01130 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LDLRP01130 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.33■□□□□ 0.36
LDLRP01130 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.33■□□□□ 0.36
LDLRP01130 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LDLRP01130 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.33■□□□□ 0.36
LDLRP01130 AL357033.4-201ENST00000617703 1807 ntBASIC17.33■□□□□ 0.36
LDLRP01130 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
LDLRP01130 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
LDLRP01130 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.33■□□□□ 0.36
LDLRP01130 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
LDLRP01130 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LDLRP01130 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LDLRP01130 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LDLRP01130 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LDLRP01130 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.32■□□□□ 0.36
LDLRP01130 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
LDLRP01130 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
LDLRP01130 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.32■□□□□ 0.36
LDLRP01130 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LDLRP01130 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LDLRP01130 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
LDLRP01130 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LDLRP01130 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
LDLRP01130 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LDLRP01130 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LDLRP01130 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LDLRP01130 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LDLRP01130 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LDLRP01130 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.32■□□□□ 0.36
LDLRP01130 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.32■□□□□ 0.36
LDLRP01130 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
LDLRP01130 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LDLRP01130 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LDLRP01130 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LDLRP01130 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.32■□□□□ 0.36
LDLRP01130 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LDLRP01130 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LDLRP01130 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LDLRP01130 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
LDLRP01130 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
LDLRP01130 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LDLRP01130 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.32■□□□□ 0.36
LDLRP01130 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.31■□□□□ 0.36
LDLRP01130 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LDLRP01130 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms