Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRUB2O95900 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRUB2O95900 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRUB2O95900 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRUB2O95900 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRUB2O95900 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRUB2O95900 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRUB2O95900 KRT18P1-202ENST00000452408 1331 ntBASIC18.77■□□□□ 0.6
TRUB2O95900 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRUB2O95900 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRUB2O95900 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRUB2O95900 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.77■□□□□ 0.6
TRUB2O95900 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
TRUB2O95900 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRUB2O95900 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
TRUB2O95900 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRUB2O95900 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
TRUB2O95900 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRUB2O95900 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRUB2O95900 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
TRUB2O95900 ATP5G2P1-201ENST00000433580 426 ntBASIC18.77■□□□□ 0.6
TRUB2O95900 AC068472.1-201ENST00000474589 881 ntBASIC18.77■□□□□ 0.6
TRUB2O95900 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.77■□□□□ 0.6
TRUB2O95900 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
TRUB2O95900 AP002414.4-201ENST00000589764 1148 ntBASIC18.77■□□□□ 0.6
TRUB2O95900 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.77■□□□□ 0.6
TRUB2O95900 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRUB2O95900 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRUB2O95900 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRUB2O95900 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.77■□□□□ 0.6
TRUB2O95900 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRUB2O95900 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRUB2O95900 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRUB2O95900 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TRUB2O95900 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TRUB2O95900 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.77■□□□□ 0.59
TRUB2O95900 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.76■□□□□ 0.59
TRUB2O95900 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.76■□□□□ 0.59
TRUB2O95900 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.76■□□□□ 0.59
TRUB2O95900 AC022898.2-201ENST00000616822 1312 ntBASIC18.76■□□□□ 0.59
TRUB2O95900 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRUB2O95900 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRUB2O95900 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.76■□□□□ 0.59
TRUB2O95900 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.76■□□□□ 0.59
TRUB2O95900 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.76■□□□□ 0.59
TRUB2O95900 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.76■□□□□ 0.59
TRUB2O95900 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.76■□□□□ 0.59
TRUB2O95900 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRUB2O95900 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRUB2O95900 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
TRUB2O95900 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.76■□□□□ 0.59
TRUB2O95900 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
TRUB2O95900 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
TRUB2O95900 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRUB2O95900 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.76■□□□□ 0.59
TRUB2O95900 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.76■□□□□ 0.59
TRUB2O95900 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.76■□□□□ 0.59
TRUB2O95900 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.76■□□□□ 0.59
TRUB2O95900 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.76■□□□□ 0.59
TRUB2O95900 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRUB2O95900 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.76■□□□□ 0.59
TRUB2O95900 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRUB2O95900 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRUB2O95900 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.76■□□□□ 0.59
TRUB2O95900 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
TRUB2O95900 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TRUB2O95900 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TRUB2O95900 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.76■□□□□ 0.59
TRUB2O95900 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TRUB2O95900 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.75■□□□□ 0.59
TRUB2O95900 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRUB2O95900 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.75■□□□□ 0.59
TRUB2O95900 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRUB2O95900 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRUB2O95900 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRUB2O95900 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRUB2O95900 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRUB2O95900 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
TRUB2O95900 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.75■□□□□ 0.59
TRUB2O95900 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TRUB2O95900 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
TRUB2O95900 MIR3180-1-201ENST00000580374 94 ntBASIC18.75■□□□□ 0.59
TRUB2O95900 MIR3180-3-201ENST00000584616 94 ntBASIC18.75■□□□□ 0.59
TRUB2O95900 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRUB2O95900 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRUB2O95900 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.75■□□□□ 0.59
TRUB2O95900 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TRUB2O95900 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.75■□□□□ 0.59
TRUB2O95900 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRUB2O95900 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.75■□□□□ 0.59
TRUB2O95900 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
TRUB2O95900 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.75■□□□□ 0.59
TRUB2O95900 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRUB2O95900 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
TRUB2O95900 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.74■□□□□ 0.59
TRUB2O95900 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.74■□□□□ 0.59
TRUB2O95900 LINC00896-202ENST00000609602 2128 ntBASIC18.74■□□□□ 0.59
TRUB2O95900 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRUB2O95900 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.74■□□□□ 0.59
TRUB2O95900 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms