Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTN3O95197 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RTN3O95197 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTN3O95197 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTN3O95197 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
RTN3O95197 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RTN3O95197 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.85■□□□□ 0.61
RTN3O95197 FAAHP1-202ENST00000446499 1238 ntBASIC18.85■□□□□ 0.61
RTN3O95197 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.85■□□□□ 0.61
RTN3O95197 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.85■□□□□ 0.61
RTN3O95197 AC096582.2-201ENST00000510860 516 ntBASIC18.85■□□□□ 0.61
RTN3O95197 DUTP2-201ENST00000519164 463 ntBASIC18.85■□□□□ 0.61
RTN3O95197 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.85■□□□□ 0.61
RTN3O95197 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.85■□□□□ 0.61
RTN3O95197 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.85■□□□□ 0.61
RTN3O95197 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RTN3O95197 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.85■□□□□ 0.61
RTN3O95197 AL138831.2-201ENST00000606564 490 ntBASIC18.85■□□□□ 0.61
RTN3O95197 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTN3O95197 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RTN3O95197 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTN3O95197 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.85■□□□□ 0.61
RTN3O95197 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTN3O95197 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTN3O95197 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.85■□□□□ 0.61
RTN3O95197 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.84■□□□□ 0.61
RTN3O95197 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTN3O95197 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTN3O95197 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
RTN3O95197 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTN3O95197 AC125634.1-201ENST00000438758 1403 ntBASIC18.84■□□□□ 0.61
RTN3O95197 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.84■□□□□ 0.61
RTN3O95197 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.84■□□□□ 0.61
RTN3O95197 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.84■□□□□ 0.61
RTN3O95197 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTN3O95197 TNRC18P3-201ENST00000441896 2691 ntBASIC18.84■□□□□ 0.61
RTN3O95197 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTN3O95197 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.84■□□□□ 0.61
RTN3O95197 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
RTN3O95197 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RTN3O95197 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTN3O95197 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RTN3O95197 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.84■□□□□ 0.61
RTN3O95197 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.84■□□□□ 0.61
RTN3O95197 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.84■□□□□ 0.61
RTN3O95197 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.84■□□□□ 0.61
RTN3O95197 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RTN3O95197 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.84■□□□□ 0.61
RTN3O95197 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.84■□□□□ 0.61
RTN3O95197 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RTN3O95197 AC114341.1-201ENST00000618070 349 ntBASIC18.84■□□□□ 0.61
RTN3O95197 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTN3O95197 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RTN3O95197 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTN3O95197 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTN3O95197 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTN3O95197 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTN3O95197 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTN3O95197 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RTN3O95197 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTN3O95197 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.84■□□□□ 0.61
RTN3O95197 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTN3O95197 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTN3O95197 AC093677.2-201ENST00000600169 1863 ntBASIC18.84■□□□□ 0.61
RTN3O95197 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.84■□□□□ 0.61
RTN3O95197 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTN3O95197 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RTN3O95197 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RTN3O95197 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RTN3O95197 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
RTN3O95197 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
RTN3O95197 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
RTN3O95197 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RTN3O95197 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.83■□□□□ 0.6
RTN3O95197 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.83■□□□□ 0.6
RTN3O95197 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RTN3O95197 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.83■□□□□ 0.6
RTN3O95197 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.83■□□□□ 0.6
RTN3O95197 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.83■□□□□ 0.6
RTN3O95197 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.83■□□□□ 0.6
RTN3O95197 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.83■□□□□ 0.6
RTN3O95197 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
RTN3O95197 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RTN3O95197 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RTN3O95197 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RTN3O95197 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
RTN3O95197 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RTN3O95197 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RTN3O95197 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RTN3O95197 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RTN3O95197 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RTN3O95197 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
RTN3O95197 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
RTN3O95197 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
RTN3O95197 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
RTN3O95197 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.83■□□□□ 0.6
RTN3O95197 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
RTN3O95197 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
RTN3O95197 AL096828.2-201ENST00000567259 1965 ntBASIC18.82■□□□□ 0.6
RTN3O95197 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms