Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
USP1O94782 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
USP1O94782 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
USP1O94782 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP1O94782 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
USP1O94782 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP1O94782 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
USP1O94782 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.15■□□□□ 0.5
USP1O94782 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP1O94782 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP1O94782 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP1O94782 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.15■□□□□ 0.5
USP1O94782 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.15■□□□□ 0.5
USP1O94782 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
USP1O94782 AC141257.4-201ENST00000634557 245 ntBASIC18.15■□□□□ 0.5
USP1O94782 AC136944.6-201ENST00000634818 245 ntBASIC18.15■□□□□ 0.5
USP1O94782 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
USP1O94782 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
USP1O94782 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
USP1O94782 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
USP1O94782 AC022898.2-201ENST00000616822 1312 ntBASIC18.15■□□□□ 0.5
USP1O94782 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
USP1O94782 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
USP1O94782 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
USP1O94782 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
USP1O94782 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
USP1O94782 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
USP1O94782 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP1O94782 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP1O94782 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
USP1O94782 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
USP1O94782 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.14■□□□□ 0.5
USP1O94782 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.14■□□□□ 0.5
USP1O94782 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.14■□□□□ 0.5
USP1O94782 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP1O94782 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP1O94782 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP1O94782 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP1O94782 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
USP1O94782 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
USP1O94782 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
USP1O94782 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.14■□□□□ 0.49
USP1O94782 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP1O94782 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP1O94782 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.14■□□□□ 0.49
USP1O94782 KRT18P21-201ENST00000515767 1272 ntBASIC18.14■□□□□ 0.49
USP1O94782 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.14■□□□□ 0.49
USP1O94782 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.14■□□□□ 0.49
USP1O94782 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.14■□□□□ 0.49
USP1O94782 AL138966.2-201ENST00000621997 464 ntBASIC18.14■□□□□ 0.49
USP1O94782 AC124067.4-201ENST00000519691 2379 ntBASIC18.14■□□□□ 0.49
USP1O94782 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
USP1O94782 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
USP1O94782 AC080080.1-201ENST00000625121 2420 ntBASIC18.14■□□□□ 0.49
USP1O94782 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP1O94782 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
USP1O94782 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
USP1O94782 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP1O94782 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
USP1O94782 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
USP1O94782 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.14■□□□□ 0.49
USP1O94782 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP1O94782 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.14■□□□□ 0.49
USP1O94782 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
USP1O94782 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP1O94782 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP1O94782 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP1O94782 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.13■□□□□ 0.49
USP1O94782 AC113404.2-201ENST00000507884 177 ntBASIC18.13■□□□□ 0.49
USP1O94782 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.13■□□□□ 0.49
USP1O94782 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
USP1O94782 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.13■□□□□ 0.49
USP1O94782 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP1O94782 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.13■□□□□ 0.49
USP1O94782 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP1O94782 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
USP1O94782 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP1O94782 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.13■□□□□ 0.49
USP1O94782 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP1O94782 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.13■□□□□ 0.49
USP1O94782 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.13■□□□□ 0.49
USP1O94782 AC100803.2-201ENST00000562459 1963 ntBASIC18.13■□□□□ 0.49
USP1O94782 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP1O94782 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.13■□□□□ 0.49
USP1O94782 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.13■□□□□ 0.49
USP1O94782 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP1O94782 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP1O94782 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
USP1O94782 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
USP1O94782 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP1O94782 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP1O94782 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP1O94782 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP1O94782 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
USP1O94782 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP1O94782 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.12■□□□□ 0.49
USP1O94782 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
USP1O94782 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP1O94782 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
USP1O94782 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms