Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRPF40AO75400 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRPF40AO75400 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
PRPF40AO75400 MESTP1-201ENST00000404287 994 ntBASIC20.85■□□□□ 0.93
PRPF40AO75400 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.85■□□□□ 0.93
PRPF40AO75400 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.85■□□□□ 0.93
PRPF40AO75400 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PRPF40AO75400 MIR3180-5-201ENST00000583743 153 ntBASIC20.85■□□□□ 0.93
PRPF40AO75400 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.85■□□□□ 0.93
PRPF40AO75400 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
PRPF40AO75400 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRPF40AO75400 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRPF40AO75400 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
PRPF40AO75400 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRPF40AO75400 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PRPF40AO75400 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRPF40AO75400 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRPF40AO75400 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.85■□□□□ 0.93
PRPF40AO75400 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRPF40AO75400 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.85■□□□□ 0.93
PRPF40AO75400 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.85■□□□□ 0.93
PRPF40AO75400 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC20.84■□□□□ 0.93
PRPF40AO75400 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRPF40AO75400 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRPF40AO75400 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRPF40AO75400 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
PRPF40AO75400 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRPF40AO75400 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC20.84■□□□□ 0.93
PRPF40AO75400 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.84■□□□□ 0.93
PRPF40AO75400 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PRPF40AO75400 FSCN1P1-201ENST00000568912 1481 ntBASIC20.84■□□□□ 0.93
PRPF40AO75400 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
PRPF40AO75400 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRPF40AO75400 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.84■□□□□ 0.93
PRPF40AO75400 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.84■□□□□ 0.93
PRPF40AO75400 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
PRPF40AO75400 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
PRPF40AO75400 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRPF40AO75400 NUDT16P1-203ENST00000513809 620 ntBASIC20.84■□□□□ 0.93
PRPF40AO75400 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.84■□□□□ 0.93
PRPF40AO75400 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRPF40AO75400 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRPF40AO75400 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRPF40AO75400 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
PRPF40AO75400 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.84■□□□□ 0.93
PRPF40AO75400 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRPF40AO75400 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRPF40AO75400 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.84■□□□□ 0.93
PRPF40AO75400 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PRPF40AO75400 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PRPF40AO75400 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PRPF40AO75400 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PRPF40AO75400 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PRPF40AO75400 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PRPF40AO75400 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PRPF40AO75400 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
PRPF40AO75400 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PRPF40AO75400 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.83■□□□□ 0.93
PRPF40AO75400 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PRPF40AO75400 AL355355.2-201ENST00000442321 338 ntBASIC20.83■□□□□ 0.93
PRPF40AO75400 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
PRPF40AO75400 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PRPF40AO75400 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.83■□□□□ 0.93
PRPF40AO75400 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PRPF40AO75400 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PRPF40AO75400 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.83■□□□□ 0.92
PRPF40AO75400 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
PRPF40AO75400 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.83■□□□□ 0.92
PRPF40AO75400 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.82■□□□□ 0.92
PRPF40AO75400 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
PRPF40AO75400 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
PRPF40AO75400 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.82■□□□□ 0.92
PRPF40AO75400 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.82■□□□□ 0.92
PRPF40AO75400 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.82■□□□□ 0.92
PRPF40AO75400 AC026471.5-201ENST00000615068 467 ntBASIC20.82■□□□□ 0.92
PRPF40AO75400 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC20.82■□□□□ 0.92
PRPF40AO75400 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRPF40AO75400 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.82■□□□□ 0.92
PRPF40AO75400 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
PRPF40AO75400 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
PRPF40AO75400 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC20.82■□□□□ 0.92
PRPF40AO75400 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PRPF40AO75400 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRPF40AO75400 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC20.82■□□□□ 0.92
PRPF40AO75400 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRPF40AO75400 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRPF40AO75400 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRPF40AO75400 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PRPF40AO75400 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRPF40AO75400 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.81■□□□□ 0.92
PRPF40AO75400 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PRPF40AO75400 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRPF40AO75400 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRPF40AO75400 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRPF40AO75400 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.81■□□□□ 0.92
PRPF40AO75400 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.81■□□□□ 0.92
PRPF40AO75400 AC116562.2-201ENST00000507042 360 ntBASIC20.81■□□□□ 0.92
PRPF40AO75400 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.81■□□□□ 0.92
PRPF40AO75400 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.81■□□□□ 0.92
PRPF40AO75400 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms