Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM3O75382 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM3O75382 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM3O75382 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM3O75382 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM3O75382 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM3O75382 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM3O75382 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TRIM3O75382 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM3O75382 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM3O75382 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.72■□□□□ 0.27
TRIM3O75382 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.72■□□□□ 0.27
TRIM3O75382 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.72■□□□□ 0.27
TRIM3O75382 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM3O75382 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM3O75382 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TRIM3O75382 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TRIM3O75382 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM3O75382 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM3O75382 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.72■□□□□ 0.27
TRIM3O75382 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM3O75382 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TRIM3O75382 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.72■□□□□ 0.27
TRIM3O75382 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM3O75382 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.72■□□□□ 0.27
TRIM3O75382 AC069148.1-201ENST00000608741 768 ntBASIC16.72■□□□□ 0.27
TRIM3O75382 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TRIM3O75382 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM3O75382 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM3O75382 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM3O75382 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.72■□□□□ 0.27
TRIM3O75382 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM3O75382 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM3O75382 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM3O75382 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM3O75382 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.71■□□□□ 0.27
TRIM3O75382 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM3O75382 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
TRIM3O75382 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM3O75382 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM3O75382 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.71■□□□□ 0.27
TRIM3O75382 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM3O75382 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM3O75382 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM3O75382 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM3O75382 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TRIM3O75382 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM3O75382 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM3O75382 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.71■□□□□ 0.27
TRIM3O75382 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.71■□□□□ 0.27
TRIM3O75382 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.71■□□□□ 0.27
TRIM3O75382 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
TRIM3O75382 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TRIM3O75382 AC024563.2-201ENST00000603282 481 ntBASIC16.71■□□□□ 0.27
TRIM3O75382 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM3O75382 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TRIM3O75382 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM3O75382 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM3O75382 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM3O75382 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
TRIM3O75382 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM3O75382 CROCCP1-201ENST00000426910 5675 ntBASIC16.71■□□□□ 0.26
TRIM3O75382 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TRIM3O75382 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.71■□□□□ 0.26
TRIM3O75382 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
TRIM3O75382 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TRIM3O75382 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.71■□□□□ 0.26
TRIM3O75382 SDHAP2-201ENST00000455183 2001 ntBASIC16.7■□□□□ 0.26
TRIM3O75382 AC126763.1-201ENST00000552015 2118 ntBASIC16.7■□□□□ 0.26
TRIM3O75382 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM3O75382 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TRIM3O75382 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM3O75382 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM3O75382 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM3O75382 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM3O75382 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.7■□□□□ 0.26
TRIM3O75382 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.7■□□□□ 0.26
TRIM3O75382 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM3O75382 KRT89P-201ENST00000620027 1478 ntBASIC16.7■□□□□ 0.26
TRIM3O75382 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM3O75382 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
TRIM3O75382 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM3O75382 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM3O75382 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.7■□□□□ 0.26
TRIM3O75382 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.7■□□□□ 0.26
TRIM3O75382 KRT18P48-201ENST00000434763 852 ntBASIC16.7■□□□□ 0.26
TRIM3O75382 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.7■□□□□ 0.26
TRIM3O75382 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
TRIM3O75382 RNF126P1-202ENST00000569893 925 ntBASIC16.7■□□□□ 0.26
TRIM3O75382 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.7■□□□□ 0.26
TRIM3O75382 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.7■□□□□ 0.26
TRIM3O75382 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.7■□□□□ 0.26
TRIM3O75382 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM3O75382 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM3O75382 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM3O75382 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM3O75382 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TRIM3O75382 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TRIM3O75382 ABALON-201ENST00000629058 1903 ntBASIC16.7■□□□□ 0.26
TRIM3O75382 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms