Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.06■□□□□ 0.32
CLOCKO15516 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.06■□□□□ 0.32
CLOCKO15516 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLOCKO15516 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CLOCKO15516 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.06■□□□□ 0.32
CLOCKO15516 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.06■□□□□ 0.32
CLOCKO15516 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
CLOCKO15516 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLOCKO15516 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.06■□□□□ 0.32
CLOCKO15516 AC131212.4-201ENST00000623606 975 ntBASIC17.06■□□□□ 0.32
CLOCKO15516 CR392000.1-201ENST00000624770 1228 ntBASIC17.06■□□□□ 0.32
CLOCKO15516 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.06■□□□□ 0.32
CLOCKO15516 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CLOCKO15516 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLOCKO15516 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLOCKO15516 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLOCKO15516 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLOCKO15516 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CLOCKO15516 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLOCKO15516 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
CLOCKO15516 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
CLOCKO15516 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CLOCKO15516 AC046158.3-201ENST00000624947 2558 ntBASIC17.05■□□□□ 0.32
CLOCKO15516 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLOCKO15516 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CLOCKO15516 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CLOCKO15516 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLOCKO15516 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.05■□□□□ 0.32
CLOCKO15516 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.05■□□□□ 0.32
CLOCKO15516 LINC00602-201ENST00000629776 2065 ntBASIC17.05■□□□□ 0.32
CLOCKO15516 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLOCKO15516 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLOCKO15516 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CLOCKO15516 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLOCKO15516 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLOCKO15516 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CLOCKO15516 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLOCKO15516 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.05■□□□□ 0.32
CLOCKO15516 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.05■□□□□ 0.32
CLOCKO15516 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLOCKO15516 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLOCKO15516 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLOCKO15516 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLOCKO15516 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CLOCKO15516 AL356309.3-201ENST00000624132 1934 ntBASIC17.05■□□□□ 0.32
CLOCKO15516 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CLOCKO15516 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.05■□□□□ 0.32
CLOCKO15516 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLOCKO15516 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CLOCKO15516 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.05■□□□□ 0.32
CLOCKO15516 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLOCKO15516 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLOCKO15516 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLOCKO15516 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLOCKO15516 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLOCKO15516 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLOCKO15516 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLOCKO15516 AL109659.2-201ENST00000606809 1674 ntBASIC17.04■□□□□ 0.32
CLOCKO15516 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLOCKO15516 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLOCKO15516 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CLOCKO15516 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CLOCKO15516 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLOCKO15516 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLOCKO15516 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLOCKO15516 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLOCKO15516 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLOCKO15516 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLOCKO15516 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
CLOCKO15516 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLOCKO15516 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLOCKO15516 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.04■□□□□ 0.32
CLOCKO15516 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.04■□□□□ 0.32
CLOCKO15516 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CLOCKO15516 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.04■□□□□ 0.32
CLOCKO15516 KRT18P21-201ENST00000515767 1272 ntBASIC17.04■□□□□ 0.32
CLOCKO15516 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.04■□□□□ 0.32
CLOCKO15516 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLOCKO15516 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.04■□□□□ 0.32
CLOCKO15516 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.04■□□□□ 0.32
CLOCKO15516 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLOCKO15516 AL353708.3-201ENST00000610272 989 ntBASIC17.04■□□□□ 0.32
CLOCKO15516 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CLOCKO15516 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CLOCKO15516 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
CLOCKO15516 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLOCKO15516 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLOCKO15516 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CLOCKO15516 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CLOCKO15516 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLOCKO15516 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.04■□□□□ 0.32
CLOCKO15516 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.04■□□□□ 0.32
CLOCKO15516 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLOCKO15516 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.04■□□□□ 0.32
CLOCKO15516 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLOCKO15516 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLOCKO15516 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLOCKO15516 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.04■□□□□ 0.32
CLOCKO15516 AL391005.1-201ENST00000623953 2435 ntBASIC17.04■□□□□ 0.32
CLOCKO15516 FER1L4-210ENST00000615531 5998 ntBASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms