Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNFRSF11BO00300 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNFRSF11BO00300 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.59■□□□□ 0.25
TNFRSF11BO00300 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNFRSF11BO00300 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.59■□□□□ 0.25
TNFRSF11BO00300 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TNFRSF11BO00300 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.59■□□□□ 0.25
TNFRSF11BO00300 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.59■□□□□ 0.25
TNFRSF11BO00300 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNFRSF11BO00300 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TNFRSF11BO00300 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNFRSF11BO00300 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNFRSF11BO00300 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNFRSF11BO00300 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.59■□□□□ 0.25
TNFRSF11BO00300 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.59■□□□□ 0.25
TNFRSF11BO00300 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TNFRSF11BO00300 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.59■□□□□ 0.25
TNFRSF11BO00300 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.59■□□□□ 0.25
TNFRSF11BO00300 CR769767.2-201ENST00000622735 460 ntBASIC16.59■□□□□ 0.25
TNFRSF11BO00300 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TNFRSF11BO00300 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNFRSF11BO00300 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TNFRSF11BO00300 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNFRSF11BO00300 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNFRSF11BO00300 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNFRSF11BO00300 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNFRSF11BO00300 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNFRSF11BO00300 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.59■□□□□ 0.25
TNFRSF11BO00300 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNFRSF11BO00300 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNFRSF11BO00300 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TNFRSF11BO00300 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.59■□□□□ 0.25
TNFRSF11BO00300 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TNFRSF11BO00300 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
TNFRSF11BO00300 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.59■□□□□ 0.25
TNFRSF11BO00300 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.59■□□□□ 0.25
TNFRSF11BO00300 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TNFRSF11BO00300 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
TNFRSF11BO00300 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
TNFRSF11BO00300 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.58■□□□□ 0.25
TNFRSF11BO00300 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TNFRSF11BO00300 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TNFRSF11BO00300 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TNFRSF11BO00300 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
TNFRSF11BO00300 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TNFRSF11BO00300 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TNFRSF11BO00300 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TNFRSF11BO00300 AC104390.1-201ENST00000555663 520 ntBASIC16.58■□□□□ 0.24
TNFRSF11BO00300 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.58■□□□□ 0.24
TNFRSF11BO00300 MIR3180-4-201ENST00000582223 153 ntBASIC16.58■□□□□ 0.24
TNFRSF11BO00300 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TNFRSF11BO00300 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.58■□□□□ 0.24
TNFRSF11BO00300 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
TNFRSF11BO00300 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TNFRSF11BO00300 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
TNFRSF11BO00300 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TNFRSF11BO00300 AC132938.6-201ENST00000623828 1655 ntBASIC16.58■□□□□ 0.24
TNFRSF11BO00300 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
TNFRSF11BO00300 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.58■□□□□ 0.24
TNFRSF11BO00300 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
TNFRSF11BO00300 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.58■□□□□ 0.24
TNFRSF11BO00300 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TNFRSF11BO00300 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.58■□□□□ 0.24
TNFRSF11BO00300 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TNFRSF11BO00300 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
TNFRSF11BO00300 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TNFRSF11BO00300 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TNFRSF11BO00300 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TNFRSF11BO00300 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TNFRSF11BO00300 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TNFRSF11BO00300 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
TNFRSF11BO00300 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TNFRSF11BO00300 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TNFRSF11BO00300 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TNFRSF11BO00300 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
TNFRSF11BO00300 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TNFRSF11BO00300 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TNFRSF11BO00300 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
TNFRSF11BO00300 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.57■□□□□ 0.24
TNFRSF11BO00300 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TNFRSF11BO00300 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TNFRSF11BO00300 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
TNFRSF11BO00300 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.57■□□□□ 0.24
TNFRSF11BO00300 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TNFRSF11BO00300 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TNFRSF11BO00300 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TNFRSF11BO00300 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TNFRSF11BO00300 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.57■□□□□ 0.24
TNFRSF11BO00300 AC022898.2-201ENST00000616822 1312 ntBASIC16.57■□□□□ 0.24
TNFRSF11BO00300 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TNFRSF11BO00300 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TNFRSF11BO00300 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TNFRSF11BO00300 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TNFRSF11BO00300 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.57■□□□□ 0.24
TNFRSF11BO00300 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.57■□□□□ 0.24
TNFRSF11BO00300 WWOX-216ENST00000569818 525 ntBASIC16.57■□□□□ 0.24
TNFRSF11BO00300 AL359736.2-201ENST00000621992 437 ntBASIC16.57■□□□□ 0.24
TNFRSF11BO00300 AC112497.1-201ENST00000624824 639 ntBASIC16.57■□□□□ 0.24
TNFRSF11BO00300 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TNFRSF11BO00300 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms