Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.33■□□□□ 0.2
NPIPA2E9PIF3 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPA2E9PIF3 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPA2E9PIF3 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPA2E9PIF3 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPA2E9PIF3 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
NPIPA2E9PIF3 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPA2E9PIF3 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.33■□□□□ 0.2
NPIPA2E9PIF3 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.33■□□□□ 0.2
NPIPA2E9PIF3 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPA2E9PIF3 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.33■□□□□ 0.2
NPIPA2E9PIF3 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPA2E9PIF3 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.33■□□□□ 0.2
NPIPA2E9PIF3 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPA2E9PIF3 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.33■□□□□ 0.2
NPIPA2E9PIF3 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPA2E9PIF3 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPA2E9PIF3 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.33■□□□□ 0.2
NPIPA2E9PIF3 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPA2E9PIF3 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPA2E9PIF3 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPA2E9PIF3 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPA2E9PIF3 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
NPIPA2E9PIF3 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
NPIPA2E9PIF3 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.33■□□□□ 0.2
NPIPA2E9PIF3 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPA2E9PIF3 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.33■□□□□ 0.2
NPIPA2E9PIF3 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPA2E9PIF3 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPA2E9PIF3 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPA2E9PIF3 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPA2E9PIF3 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
NPIPA2E9PIF3 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPA2E9PIF3 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
NPIPA2E9PIF3 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPA2E9PIF3 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPA2E9PIF3 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
NPIPA2E9PIF3 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
NPIPA2E9PIF3 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPA2E9PIF3 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPA2E9PIF3 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPA2E9PIF3 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPA2E9PIF3 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.32■□□□□ 0.2
NPIPA2E9PIF3 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
NPIPA2E9PIF3 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPA2E9PIF3 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPA2E9PIF3 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
NPIPA2E9PIF3 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
NPIPA2E9PIF3 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPA2E9PIF3 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.32■□□□□ 0.2
NPIPA2E9PIF3 KRT16P4-201ENST00000453883 522 ntBASIC16.32■□□□□ 0.2
NPIPA2E9PIF3 AC009078.2-202ENST00000463353 338 ntBASIC16.32■□□□□ 0.2
NPIPA2E9PIF3 AC113404.2-201ENST00000507884 177 ntBASIC16.32■□□□□ 0.2
NPIPA2E9PIF3 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.32■□□□□ 0.2
NPIPA2E9PIF3 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.32■□□□□ 0.2
NPIPA2E9PIF3 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPA2E9PIF3 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.32■□□□□ 0.2
NPIPA2E9PIF3 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.32■□□□□ 0.2
NPIPA2E9PIF3 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPA2E9PIF3 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.32■□□□□ 0.2
NPIPA2E9PIF3 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPA2E9PIF3 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.32■□□□□ 0.2
NPIPA2E9PIF3 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPA2E9PIF3 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.31■□□□□ 0.2
NPIPA2E9PIF3 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.31■□□□□ 0.2
NPIPA2E9PIF3 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPA2E9PIF3 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPA2E9PIF3 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPA2E9PIF3 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.31■□□□□ 0.2
NPIPA2E9PIF3 ESPNP-201ENST00000270691 2015 ntBASIC16.31■□□□□ 0.2
NPIPA2E9PIF3 AL024508.2-201ENST00000607749 1894 ntBASIC16.31■□□□□ 0.2
NPIPA2E9PIF3 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.31■□□□□ 0.2
NPIPA2E9PIF3 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPA2E9PIF3 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPA2E9PIF3 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.31■□□□□ 0.2
NPIPA2E9PIF3 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPA2E9PIF3 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPA2E9PIF3 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPA2E9PIF3 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.31■□□□□ 0.2
NPIPA2E9PIF3 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.31■□□□□ 0.2
NPIPA2E9PIF3 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPA2E9PIF3 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPA2E9PIF3 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
NPIPA2E9PIF3 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.31■□□□□ 0.2
NPIPA2E9PIF3 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPA2E9PIF3 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
NPIPA2E9PIF3 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPA2E9PIF3 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPA2E9PIF3 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
NPIPA2E9PIF3 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.31■□□□□ 0.2
NPIPA2E9PIF3 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.31■□□□□ 0.2
NPIPA2E9PIF3 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.31■□□□□ 0.2
NPIPA2E9PIF3 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.31■□□□□ 0.2
NPIPA2E9PIF3 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.31■□□□□ 0.2
NPIPA2E9PIF3 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.31■□□□□ 0.2
NPIPA2E9PIF3 AL160237.2-201ENST00000556165 472 ntBASIC16.31■□□□□ 0.2
NPIPA2E9PIF3 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
NPIPA2E9PIF3 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPA2E9PIF3 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPA2E9PIF3 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms